RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 FAM234AQ9H0X4 552 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 RBM38Q9H0Z9 239 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 OR52A5Q9H2C5 316 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SEMA6AQ9H2E6 1030 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 RPF2Q9H7B2 306 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 KIR3DX1Q9H7L2 352 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 DDX31Q9H8H2 851 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 EVA1AQ9H8M9 152 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TRIM45Q9H8W5 580 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 REEP1Q9H902 201 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF556Q9HAH1 456 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TPT1P8Q9HAU6 139 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 CCNB1IP1Q9NPC3 277 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 KRCC1Q9NPI7 259 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 FARSBQ9NSD9 589 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 ACSS1Q9NUB1 689 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 GIMAP4Q9NUV9 329 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SCN3BQ9NY72 215 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 TAS2R9Q9NYW1 312 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 SLC25A37Q9NYZ2 338 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 UBAP1Q9NZ09 502 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 ZNF69Q9UC07 566 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 GIMAP2Q9UG22 337 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 FAF1Q9UNN5 650 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 DLGAP4Q9Y2H0 992 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 KLHL20Q9Y2M5 609 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 KLF13Q9Y2Y9 288 aaPredicted RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 TPRKBQ9Y3C4 175 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 FAM96BQ9Y3D0 163 aa2.82□□□□□ -1.96
SPG11-225ENST00000561391 FAM32AQ9Y421 112 aaKnown RBP2.82□□□□□ -1.96
SPG11-225ENST00000561391 RAI1Q7Z5J4 1906 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 ARHGAP21Q5T5U3 1957 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ALPK2Q86TB3 2170 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 LOC102723996A0A087X1L8 192 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 LOC100130705A0A1B0GUX0 176 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 C1orf226A1L170 272 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 LRIT2A6NDA9 550 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ARRDC5A6NEK1 342 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TRIM64CA6NLI5 447 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 DUXAA6NLW8 204 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 C5orf58C9J3I9 102 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 C9JVG2 144 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 G3V3Y1 287 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 MS4A18H0YCH9 400 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 M0QX08 132 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 EI24O14681 340 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 HS3ST1O14792 307 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TNFRSF13BO14836 293 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 ADAMDEC1O15204 470 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 OR1F1O43749 312 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 MPZL2O60487 215 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TPST1O60507 370 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SCN2BO60939 215 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TMCC2O75069 709 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CPSF4O95639 269 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 ZNF682O95780 498 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 EPPINO95925 133 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 FABP3P05413 133 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 SOD3P08294 240 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 IFI6P09912 130 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CCDC159P0C7I6 412 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 C8orf89P0DMQ9 161 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 LAMP1P11279 417 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ANXA8P13928 327 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ARSBP15848 533 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 NCK1P16333 377 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CD22P20273 847 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 PTNP21246 168 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 USF1P22415 310 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 CRYGSP22914 178 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 EEF1B2P24534 225 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 PPP2R1BP30154 601 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 NTSP30990 170 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TLX1P31314 330 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 RRM2P31350 389 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 MPIP34949 423 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 OPRM1P35372 400 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 IFNGR2P38484 337 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CRATP43155 626 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 MAGEA5P43359 124 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 BDKRB1P46663 353 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CENPAP49450 140 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ERFP50548 548 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 HLCSP50747 726 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 CDK9P50750 372 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 NUDT6P53370 316 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TMBIM6P55061 237 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 GABARAPL2P60520 117 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 RPS15AP62244 130 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 SKP1P63208 163 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ADARB1P78563 741 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 CDK6Q00534 326 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 ROR2Q01974 943 aaKnown RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 RGS1Q08116 209 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 BIKQ13323 160 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 TSTA3Q13630 321 aaPredicted RBP2.81□□□□□ -1.96
SPG11-225ENST00000561391 FHL1Q13642 323 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 APOFQ13790 326 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 GGTLC2Q14390 218 aa2.81□□□□□ -1.96
SPG11-225ENST00000561391 KIR2DS3Q14952 304 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms