RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PRSS27Q9BQR3 290 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 RACGAP1Q9H0H5 632 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 MS4A5Q9H3V2 200 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 MEPEQ9NQ76 525 aaPredicted RBP11.38□□□□□ -0.59
TGFB3-204ENST00000556285 ZNF275Q9NSD4 429 aaPredicted RBP11.38□□□□□ -0.59
TGFB3-204ENST00000556285 TMEM38BQ9NVV0 291 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 TREM2Q9NZC2 230 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 A0A1W2PPW3 197 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 TRAPPC13A5PLN9 417 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 DHHO43323 396 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 RNF13O43567 381 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 RP2O75695 350 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 QDPRP09417 244 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 ASAH2BP0C7U1 165 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 OR8G3PP0DMU2 310 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 TNFRSF1BP20333 461 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 GPR6P46095 362 aaPredicted RBP11.37□□□□□ -0.59
TGFB3-204ENST00000556285 RBBP4Q09028 425 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 SNX32Q86XE0 403 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 DPP10Q8N608 796 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 RDH5Q92781 318 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 ZNF566Q969W8 418 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 SLC25A44Q96H78 314 aaPredicted RBP11.37□□□□□ -0.59
TGFB3-204ENST00000556285 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 ZNF426Q9BUY5 554 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 DENND2DQ9H6A0 471 aaPredicted RBP11.37□□□□□ -0.59
TGFB3-204ENST00000556285 KAT8Q9H7Z6 458 aaKnown RBP11.37□□□□□ -0.59
TGFB3-204ENST00000556285 EVA1AQ9H8M9 152 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 NANSQ9NR45 359 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 SLC7A8Q9UHI5 535 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 NDUFAF1Q9Y375 327 aa11.37□□□□□ -0.59
TGFB3-204ENST00000556285 ARHGAP32A7KAX9 2087 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 B4DSR2 109 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 WIPF1O43516 503 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 TCF21O43680 179 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 CDC14BO60729 498 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 SHOX2O60902 331 aaPredicted RBP11.36□□□□□ -0.59
TGFB3-204ENST00000556285 VENTXO95231 258 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 F13BP05160 661 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 SAGP10523 405 aaPredicted RBP11.36□□□□□ -0.59
TGFB3-204ENST00000556285 PCGF2P35227 344 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 LMO4P61968 165 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 RPS23P62266 143 aaKnown RBP11.36□□□□□ -0.59
TGFB3-204ENST00000556285 NFYCQ13952 458 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 LIPNQ5VXI9 398 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 RFLNBQ8N5W9 214 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 SLC30A7Q8NEW0 376 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 OR10A6Q8NH74 314 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 PFN4Q8NHR9 129 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 HIF1ANQ9NWT6 349 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 TAAR3PQ9P1P4 343 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 ZNF229Q9UJW7 825 aa11.36□□□□□ -0.59
TGFB3-204ENST00000556285 BLOC1S5-TXNDC5H3BN57 136 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 FBP2O00757 339 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 ANGPT2O15123 496 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 PPIHO43447 177 aaKnown RBP11.35□□□□□ -0.59
TGFB3-204ENST00000556285 BCL10O95999 233 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 HIST1H2ABP04908 130 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 GAAP10253 952 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 UMPSP11172 480 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 ACHEP22303 614 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 UGT2B15P54855 530 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 CCL8P80075 99 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 RPL18Q07020 188 aaKnown RBP11.35□□□□□ -0.59
TGFB3-204ENST00000556285 HIST3H3Q16695 136 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 AVPI1Q5T686 147 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 RGS7BPQ6MZT1 257 aaPredicted RBP11.35□□□□□ -0.59
TGFB3-204ENST00000556285 HIST3H2AQ7L7L0 130 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 NANOGNBQ7Z5D8 188 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 PATL1Q86TB9 770 aaKnown RBP11.35□□□□□ -0.59
TGFB3-204ENST00000556285 GLCCI1Q86VQ1 547 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 NKAIN4Q8IVV8 208 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 LRRC18Q8N456 261 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 SYT14Q8NB59 555 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 TMEM255BQ8WV15 326 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 DYDC1Q8WWB3 177 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 HIST1H2ACQ93077 130 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 MCHR2Q969V1 340 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 TMEM186Q96B77 213 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 MRPL13Q9BYD1 178 aaKnown RBP11.35□□□□□ -0.59
TGFB3-204ENST00000556285 PCDHAC1Q9H158 963 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 RABEP2Q9H5N1 569 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 METTL17Q9H7H0 456 aaPredicted RBP11.35□□□□□ -0.59
TGFB3-204ENST00000556285 RNF121Q9H920 327 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 C20orf141Q9NUB4 165 aa11.35□□□□□ -0.59
TGFB3-204ENST00000556285 IGLV3-9A0A075B6K5 115 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 TRMUO75648 421 aaKnown RBP11.34□□□□□ -0.59
TGFB3-204ENST00000556285 RGS9O75916 674 aaPredicted RBP11.34□□□□□ -0.59
TGFB3-204ENST00000556285 LCKP06239 509 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 MSMBP08118 114 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 MMP7P09237 267 aaPredicted RBP11.34□□□□□ -0.59
TGFB3-204ENST00000556285 ZNF250P15622 560 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 FUT1P19526 365 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 CDAP32320 146 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 LSP1P33241 339 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 AQP2P41181 271 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 CLRN1P58418 232 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 MVKQ03426 396 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 GLO1Q04760 184 aa11.34□□□□□ -0.59
TGFB3-204ENST00000556285 HNRNPA0Q13151 305 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms