RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 LOC100653049A0A140TA62 436 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 A0A1W2PPW3 197 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 AGAP5A6NIR3 686 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 LIPT2A6NK58 231 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 TMEM233B4DJY2 109 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 TRAPPC2LH3BP13 241 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 HOXA3O43365 443 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 AKAP10O43572 662 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 RRP9O43818 475 aaKnown RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 FCMRO60667 390 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 SNNO75324 88 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 BCAS1O75363 584 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 KRT34O76011 436 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 ZNF432O94892 652 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 VAMP5O95183 116 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 GPIP06744 558 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 NAT1P18440 290 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 EFNA1P20827 205 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 IMPDH1P20839 514 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 CAPZA2P47755 286 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 IDH2P48735 452 aaKnown RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 POLR2HP52434 150 aaKnown RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 MAP2K6P52564 334 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 FOXA1P55317 472 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 PAX8Q06710 450 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 LCP2Q13094 533 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 KLF10Q13118 480 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 PDE7AQ13946 482 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 CEACAM7Q14002 265 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 PDCD1Q15116 288 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 RNF151Q2KHN1 245 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 C2orf68Q2NKX9 166 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 HFEQ30201 348 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 TRMT5Q32P41 509 aaKnown RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 ALKBH6Q3KRA9 238 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 PRAMEF8Q5VWM4 474 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 PRAMEF7Q5VXH5 474 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 FAM205BPQ63HN1 556 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 TMEM225Q6GV28 225 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 TMEM154Q6P9G4 183 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 FIP1L1Q6UN15 594 aaKnown RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 EPHX4Q8IUS5 362 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 C10orf107Q8IVU9 208 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 FAM71CQ8NEG0 241 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 OR52E2Q8NGJ4 325 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 C10orf82Q8WW14 230 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 KTI12Q96EK9 354 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 ZNF75AQ96N20 296 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 TMEM237Q96Q45 408 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 OR7D2Q96RA2 312 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 SLC30A2Q9BRI3 323 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 MRI1Q9BV20 369 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 SPATA9Q9BWV2 254 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 GATA5Q9BWX5 397 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-236ENST00000556220 FGFR1OP2Q9NVK5 253 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 SEC14L4Q9UDX3 406 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 OSGIN1Q9UJX0 560 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 SLC35A3Q9Y2D2 325 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 STK38LQ9Y2H1 464 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 TMED7Q9Y3B3 224 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 CCL27Q9Y4X3 112 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 INSIG2Q9Y5U4 225 aa5.77□□□□□ -1.49
ATXN3-236ENST00000556220 SRRM5B3KS81 715 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 GSTA4O15217 222 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 EDF1O60869 148 aaKnown RBP5.76□□□□□ -1.49
ATXN3-236ENST00000556220 SEC22BO75396 215 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 STX11O75558 287 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 AK1P00568 194 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 IGHMP01871 453 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 HLA-HP01893 362 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 CHRNGP07510 517 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 BPGMP07738 259 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 INHBAP08476 426 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 IGHV4-38-2P0DP08 117 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 ZNF14P17017 642 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-236ENST00000556220 PHBP35232 272 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 PROK1P58294 105 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 SELENOVP59797 346 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 GALK2Q01415 458 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 GABPB1Q06547 395 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-236ENST00000556220 BST1Q10588 318 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 TP53BP2Q13625 1128 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 NFYCQ13952 458 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 OR7A5Q15622 319 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 MAPK14Q16539 360 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 NRN1LQ496H8 165 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 RUSC1-AS1Q66K80 236 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 Q6ZSN1 163 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 ZNF771Q7L3S4 317 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-236ENST00000556220 ARFGAP2Q8N6H7 521 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 OR56A1Q8NGH5 318 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 OR5D16Q8NGK9 328 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 LINC01006Q8NI28 216 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 PSMA8Q8TAA3 256 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 OR5P2Q8WZ92 322 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 CCL17Q92583 94 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 TSSK3Q96PN8 268 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 ZNF350Q9GZX5 532 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 GPR35Q9HC97 309 aa5.76□□□□□ -1.49
ATXN3-236ENST00000556220 EXOSC3Q9NQT5 275 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms