RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SLC35A1P78382 337 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 TIGD3Q6B0B8 471 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 FBXO46Q6PJ61 603 aaPredicted RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 RAB39BQ96DA2 213 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 HHIPQ96QV1 700 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 HTR5AP47898 357 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 STK11Q15831 433 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 TMEM176BQ3YBM2 270 aaPredicted RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 GLYATL3Q5SZD4 288 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 SLC16A14Q7RTX9 510 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 HSD17B11Q8NBQ5 300 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 WFDC5Q8TCV5 224 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 PRR14Q9BWN1 585 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 PCDHGA5Q9Y5G8 931 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 A0A087WUU8 490 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 M0QYG6 137 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 P2RY10O00398 339 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 SELENOFO60613 162 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 NSA2O95478 260 aaKnown RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 MT-ATP6P00846 226 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 THBS1P07996 1170 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 ZNF93P35789 620 aaPredicted RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 SRP9P49458 86 aaKnown RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 ERVFC1P60507 584 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 C17orf67Q0P5P2 114 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 TESK1Q15569 626 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 WDR5BQ86VZ2 330 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 NKAIN4Q8IVV8 208 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
VTI1B-204ENST00000554659 SAT2Q96F10 170 aaPredicted RBP12.85□□□□□ -0.35
VTI1B-204ENST00000554659 SLC19A1P41440 591 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 THBS3P49746 956 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 LANCL3Q6ZV70 420 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 RABEPKQ7Z6M1 372 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 FJX1Q86VR8 437 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 PPP1R3BQ86XI6 285 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 SEMA6CQ9H3T2 930 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 KIR3DX1Q9H7L2 352 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 CD207Q9UJ71 328 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 H0Y8G0 127 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 ZNF728P0DKX0 622 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 PTGER4P35408 488 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 TM4SF4P48230 202 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 CLDN17P56750 224 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 SLC36A2Q495M3 483 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 PFN4Q8NHR9 129 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 DVL3Q92997 716 aaPredicted RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 FYTTD1Q96QD9 318 aaKnown RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 ELF4Q99607 663 aaPredicted RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 LPLP06858 475 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 EEF1A2Q05639 463 aaKnown RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 CATR1Q13166 79 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 MFAP5Q13361 173 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 METRNLQ641Q3 311 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 ADAM5Q6NVV9 412 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 FAHD1Q6P587 224 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 OLIG3Q7RTU3 272 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 RASD2Q96D21 266 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 RNF170Q96K19 258 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 UQCC2Q9BRT2 126 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 OR14J1Q9UGF5 321 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 A0A1B0GTW7 788 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 A8MVM7 634 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 FXYD1O00168 92 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 TAGLN2P37802 199 aaKnown RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 EPHA4P54764 986 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 F2RL1P55085 397 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 LIM2P55344 173 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 OR10K2Q6IF99 312 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 ZNF620Q6ZNG0 422 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 NAT6Q93015 286 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 AKIP1Q9NQ31 210 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 THAP10Q9P2Z0 257 aaPredicted RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 SLC23A2Q9UGH3 650 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 A0A1B0GUL6 1792 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 SBK3P0C264 359 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 HLA-DOBP13765 273 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 NID1P14543 1247 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 DPP4P27487 766 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 BIDP55957 195 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 ARHGAP11BQ3KRB8 267 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 OGFOD3Q6PK18 319 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 LRRC18Q8N456 261 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 CCNL2Q96S94 520 aaPredicted RBP12.84□□□□□ -0.35
VTI1B-204ENST00000554659 OR52A5Q9H2C5 316 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 TNFRSF12AQ9NP84 129 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 SAGE1Q9NXZ1 904 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 ACAD8Q9UKU7 415 aa12.84□□□□□ -0.35
VTI1B-204ENST00000554659 NSG1A0A0A6YYJ2 146 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 A6NL46 340 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 C17orf112F2Z3M2 114 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 RAF1P04049 648 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 ARRB2P32121 409 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 SNCAP37840 140 aa12.83□□□□□ -0.36
VTI1B-204ENST00000554659 HTRA4P83105 476 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms