RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 ALG12Q9BV10 488 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 OR52D1Q9H346 318 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF556Q9HAH1 456 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 PDP1Q9P0J1 537 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF346Q9UL40 294 aaKnown RBP11.88□□□□□ -0.51
RPAIN-205ENST00000536255 POFUT2Q9Y2G5 429 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 AMDHD2Q9Y303 409 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ABCA4P78363 2273 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF99A8MXY4 864 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 TRMUO75648 421 aaKnown RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 WNT11O96014 354 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 RAF1P04049 648 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 APEHP13798 732 aaKnown RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 ANXA8P13928 327 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 DNASE1P24855 282 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 SDHAP31040 664 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 IST1P53990 364 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 NR1H2P55055 460 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 FOXG1P55316 489 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 ERVK-25P63136 954 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 CD47Q08722 323 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 PPA1Q15181 289 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 ALKBH2Q6NS38 261 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 ANKRD16Q6P6B7 361 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 SHQ1Q6PI26 577 aaKnown RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF620Q6ZNG0 422 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 RASSF6Q6ZTQ3 369 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 LINGO2Q7L985 606 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 CCDC36Q8IYA8 594 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 ARIH2OSQ8N7S6 290 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 OR1K1Q8NGR3 316 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF570Q96NI8 536 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 TSPAN32Q96QS1 320 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 RBP7Q96R05 134 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 MRPL13Q9BYD1 178 aaKnown RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 MOV10Q9HCE1 1003 aaKnown RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 OBP2BQ9NPH6 170 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 NRIP3Q9NQ35 241 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 PLEKHA6Q9Y2H5 1048 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 MAGED1Q9Y5V3 778 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-205ENST00000536255 CDH10Q9Y6N8 788 aa11.87□□□□□ -0.51
RPAIN-205ENST00000536255 IMPA2O14732 288 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 AHCYL1O43865 530 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 QDPRP09417 244 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-205ENST00000536255 NOS3P29474 1203 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF84P51523 738 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 UBE2NP61088 152 aaKnown RBP11.86□□□□□ -0.51
RPAIN-205ENST00000536255 TESK1Q15569 626 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 HIST3H3Q16695 136 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 THEM4Q5T1C6 240 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 CD300LDQ6UXZ3 194 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 FAM122BQ7Z309 247 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 ADCK1Q86TW2 530 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 LURAP1LQ8IV03 231 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 CLDN22Q8N7P3 220 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 SYT14Q8NB59 555 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 OR5K1Q8NHB7 308 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF519Q8TB69 540 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 MAGEE2Q8TD90 523 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-205ENST00000536255 PYDC1Q8WXC3 89 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 DNAJC9Q8WXX5 260 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 HDAC2Q92769 488 aaKnown RBP11.86□□□□□ -0.51
RPAIN-205ENST00000536255 MCHR2Q969V1 340 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 GTPBP3Q969Y2 492 aaKnown RBP11.86□□□□□ -0.51
RPAIN-205ENST00000536255 PLPPR2Q96GM1 343 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 KCNK17Q96T54 332 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 FEVQ99581 238 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 IFT27Q9BW83 186 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 DENND2DQ9H6A0 471 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-205ENST00000536255 SMURF2Q9HAU4 748 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 SLC17A5Q9NRA2 495 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 IL20Q9NYY1 176 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 IL20RAQ9UHF4 553 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 ADAM18Q9Y3Q7 739 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 ALPK2Q86TB3 2170 aa11.86□□□□□ -0.51
RPAIN-205ENST00000536255 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 ARPC3O15145 178 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 ARHGEF9O43307 516 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 DHHO43323 396 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 IDH3BO43837 385 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 ATE1O95260 518 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 TXNDC12O95881 172 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 GUCA1AP43080 201 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-205ENST00000536255 ART1P52961 327 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 FXYD6P3P58550 94 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 ARF1P84077 181 aaKnown RBP11.85□□□□□ -0.51
RPAIN-205ENST00000536255 RUNX1T1Q06455 604 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 KRR1Q13601 381 aaKnown RBP11.85□□□□□ -0.51
RPAIN-205ENST00000536255 KEAP1Q14145 624 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 TBRG1Q3YBR2 411 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 PHYHD1Q5SRE7 291 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 KLHL17Q6TDP4 642 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 SEZ6L2Q6UXD5 910 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF813Q6ZN06 617 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF627Q7L945 461 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 HIPK1Q86Z02 1210 aa11.85□□□□□ -0.51
RPAIN-205ENST00000536255 ZDHHC13Q8IUH4 622 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms