RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 IER3IP1Q9Y5U9 82 aa15.62■□□□□ 0.09
DDX55-204ENST00000536079 DHHO43323 396 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 TIPRLO75663 272 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 B4GALT1P15291 398 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 TSPAN31Q12999 210 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 MICAQ29983 383 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 RFX4Q33E94 735 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 SMARCD3Q6STE5 483 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 ZNF627Q7L945 461 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 MYPOPQ86VE0 399 aaPredicted RBP15.61■□□□□ 0.09
DDX55-204ENST00000536079 ARIH2OSQ8N7S6 290 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 FANK1Q8TC84 345 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 MAGEE2Q8TD90 523 aaPredicted RBP15.61■□□□□ 0.09
DDX55-204ENST00000536079 RASD2Q96D21 266 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 GPX7Q96SL4 187 aaPredicted RBP15.61■□□□□ 0.09
DDX55-204ENST00000536079 FOXB1Q99853 325 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 OR52D1Q9H346 318 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 KRCC1Q9NPI7 259 aaPredicted RBP15.61■□□□□ 0.09
DDX55-204ENST00000536079 B3GAT2Q9NPZ5 323 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 NRIP3Q9NQ35 241 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 POFUT2Q9Y2G5 429 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 AMDHD2Q9Y303 409 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 UGT2A1Q9Y4X1 527 aa15.61■□□□□ 0.09
DDX55-204ENST00000536079 MAGED1Q9Y5V3 778 aaPredicted RBP15.61■□□□□ 0.09
DDX55-204ENST00000536079 ARPC4-TTLL3A0A0A6YYG9 625 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 TEX13CA0A0J9YWL9 993 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 M0R1B8 84 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 GOSR1O95249 250 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 PPP1R3DO95685 299 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 HLA-HP01893 362 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 TP53P04637 393 aaPredicted RBP15.6■□□□□ 0.09
DDX55-204ENST00000536079 CELA3BP08861 270 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 PATE4P0C8F1 98 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 CDAP32320 146 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 ZNF133P52736 654 aaPredicted RBP15.6■□□□□ 0.09
DDX55-204ENST00000536079 SH3BGRP55822 239 aaPredicted RBP15.6■□□□□ 0.09
DDX55-204ENST00000536079 TAF11Q15544 211 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 SLC25A47Q6Q0C1 308 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 ZNF813Q6ZN06 617 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 ZNF704Q6ZNC4 412 aaPredicted RBP15.6■□□□□ 0.09
DDX55-204ENST00000536079 ZNF620Q6ZNG0 422 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 KBTBD8Q8NFY9 601 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 OR10G2Q8NGC3 310 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 OR8D4Q8NGM9 314 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 NSMAFQ92636 917 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 GTPBP3Q969Y2 492 aaKnown RBP15.6■□□□□ 0.09
DDX55-204ENST00000536079 NIPSNAP1Q9BPW8 284 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 PLA2G12AQ9BZM1 189 aa15.6■□□□□ 0.09
DDX55-204ENST00000536079 TEX15Q9BXT5 2789 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 CENPBD1B2RD01 187 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 SHISA9B4DS77 424 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 ARHGEF9O43307 516 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 PRKACGP22612 351 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 CD40P25942 277 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 IFNGR2P38484 337 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 CDKN2AP42771 156 aaKnown RBP15.59■□□□□ 0.09
DDX55-204ENST00000536079 CD47Q08722 323 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 ETFDHQ16134 617 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 C10orf128Q5T292 105 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 ADAM5Q6NVV9 412 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 DPY19L2P2Q6ZN68 376 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 PTCHD4Q6ZW05 846 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 SKA3Q8IX90 412 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 SH3GL3Q99963 347 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 ALG12Q9BV10 488 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 TMEM38BQ9NVV0 291 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 B3GNT2Q9NY97 397 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 GRHPRQ9UBQ7 328 aa15.59■□□□□ 0.09
DDX55-204ENST00000536079 IGHV1-18A0A0C4DH31 117 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 SLC22A23A1A5C7 686 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 SOCS2O14508 198 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 SCG5P05408 212 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 SDHAP31040 664 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 NR1H2P55055 460 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 UBE2NP61088 152 aaKnown RBP15.58■□□□□ 0.08
DDX55-204ENST00000536079 KRR1Q13601 381 aaKnown RBP15.58■□□□□ 0.08
DDX55-204ENST00000536079 KPNB1Q14974 876 aaKnown RBP15.58■□□□□ 0.08
DDX55-204ENST00000536079 MDP1Q86V88 176 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 GIPC3Q8TF64 312 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 NABP1Q96AH0 204 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 DUS3LQ96G46 650 aaKnown RBP15.58■□□□□ 0.08
DDX55-204ENST00000536079 ZNF75AQ96N20 296 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 ZNF570Q96NI8 536 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 FEVQ99581 238 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 DGCR6LQ9BY27 220 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 ESRP2Q9H6T0 727 aaKnown RBP15.58■□□□□ 0.08
DDX55-204ENST00000536079 UBTD1Q9HAC8 227 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 PDP1Q9P0J1 537 aaPredicted RBP15.58■□□□□ 0.08
DDX55-204ENST00000536079 CRNNQ9UBG3 495 aaPredicted RBP15.58■□□□□ 0.08
DDX55-204ENST00000536079 DNAJB9Q9UBS3 223 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 PLEKHA6Q9Y2H5 1048 aa15.58■□□□□ 0.08
DDX55-204ENST00000536079 AKAP6Q13023 2319 aa15.57■□□□□ 0.08
DDX55-204ENST00000536079 SPG11Q96JI7 2443 aa15.57■□□□□ 0.08
DDX55-204ENST00000536079 A6NIZ1 184 aa15.57■□□□□ 0.08
DDX55-204ENST00000536079 GNGT2O14610 69 aa15.57■□□□□ 0.08
DDX55-204ENST00000536079 ABCD4O14678 606 aa15.57■□□□□ 0.08
DDX55-204ENST00000536079 CIB2O75838 187 aa15.57■□□□□ 0.08
DDX55-204ENST00000536079 SOX14O95416 240 aa15.57■□□□□ 0.08
DDX55-204ENST00000536079 TXNDC12O95881 172 aa15.57■□□□□ 0.08
DDX55-204ENST00000536079 WNT11O96014 354 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms