RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 GRASPQ7Z6J2 395 aaPredicted RBP4.99□□□□□ -1.61
CD44-236ENST00000533222 CALHM1Q8IU99 346 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 LAX1Q8IWV1 398 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 C1orf87Q8N0U7 546 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 KIR2DL5AQ8N109 375 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 WDTC1Q8N5D0 677 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 FAM71CQ8NEG0 241 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 OR51G2Q8NGK0 314 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 OR4A15Q8NGL6 344 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 OR1K1Q8NGR3 316 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 SUN3Q8TAQ9 357 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 C2CD4CQ8TF44 421 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 SUSD6Q92537 303 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 RPUSD4Q96CM3 377 aaKnown RBP4.99□□□□□ -1.61
CD44-236ENST00000533222 ZBED6CLQ96FA7 236 aaPredicted RBP4.99□□□□□ -1.61
CD44-236ENST00000533222 TRMT61AQ96FX7 289 aaKnown RBP4.99□□□□□ -1.61
CD44-236ENST00000533222 FBXL20Q96IG2 436 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 MS4A4EQ96PG1 132 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 OR2A7Q96R45 310 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 OR8B4Q96RC9 309 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 CD180Q99467 661 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 PAFAH2Q99487 392 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 GPA33Q99795 319 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 SEMA3CQ99985 751 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 SLC5A7Q9GZV3 580 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 SIK2Q9H0K1 926 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 MAGT1Q9H0U3 335 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 ABCG5Q9H222 651 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 OR51E2Q9H255 320 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 ACTL8Q9H568 366 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 MEAF6Q9HAF1 191 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 DNAJC4Q9NNZ3 241 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 FZD3Q9NPG1 666 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 NGBQ9NPG2 151 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 HIF1ANQ9NWT6 349 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 TMEM161AQ9NX61 479 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 VPS29Q9UBQ0 182 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 TESQ9UGI8 421 aaKnown RBP4.99□□□□□ -1.61
CD44-236ENST00000533222 IKZF2Q9UKS7 526 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 PADI3Q9ULW8 664 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 MRPS17Q9Y2R5 130 aaKnown RBP4.99□□□□□ -1.61
CD44-236ENST00000533222 RREB1Q92766 1687 aa4.99□□□□□ -1.61
CD44-236ENST00000533222 FAM208AQ9UK61 1670 aaKnown RBP4.99□□□□□ -1.61
CD44-236ENST00000533222 A0A087WZY1 265 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 IGHV2-70DA0A0C4DH43 119 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 A0A0D9SG52 128 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 A0A1B0GTI1 187 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 A0A1W2PPM1 405 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 CPED1A4D0V7 1026 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 CXorf65A6NEN9 183 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ANXA2P2A6NMY6 339 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 C9J4A7 227 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 MCRIP1C9JLW8 97 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 E5RJQ4 531 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 PPP5D1E7EU14 171 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 RNASEK-C17orf49H0YIS7 233 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 HAS3O00219 553 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 UBFD1O14562 309 aaKnown RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 PHOX2AO14813 284 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 PPP1R2P9O14990 202 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 GALR3O60755 368 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 PRDM1O75626 825 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 RAD51DO75771 328 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 HPRT1P00492 218 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 C1QCP02747 245 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ADRA2AP08913 450 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ALPIP09923 528 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 EGR2P11161 476 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 CD79AP11912 226 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ETFAP13804 333 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 GPX2P18283 190 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 DGKAP23743 735 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 AK4P27144 223 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 CD1CP29017 333 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 BRS3P32247 399 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SSTR5P35346 364 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ARL3P36405 182 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 MAP2K4P45985 399 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 RFX3P48380 749 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 PXNP49023 591 aaPredicted RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 RAB9AP51151 201 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 CLDN12P56749 244 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SLC37A1P57057 533 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 RAB11AP62491 216 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 RHOGP84095 191 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 PRDX4Q13162 271 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SKP2Q13309 424 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 RAB32Q13637 225 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ZNF345Q14585 488 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 RBMS2Q15434 407 aaKnown RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 MAPK14Q16539 360 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 SOWAHAQ2M3V2 549 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 SLC36A2Q495M3 483 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 COX19Q49B96 90 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 OCIAD2Q56VL3 154 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 ALG10BQ5I7T1 473 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 COA6Q5JTJ3 125 aaKnown RBP4.98□□□□□ -1.61
CD44-236ENST00000533222 CBWD3Q5JTY5 395 aa4.98□□□□□ -1.61
CD44-236ENST00000533222 CBWD5Q5RIA9 395 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms