RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CDK1P06493 297 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 FAM228BP0C875 321 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 NDUFB7P17568 137 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 FASP25445 335 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PGFP49763 221 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 FUT6P51993 359 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 RIDAP52758 137 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 AP2S1P53680 142 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ELF3P78545 371 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ID2Q02363 134 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 RGS1Q08116 209 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 TRAF3Q13114 568 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 POU2AF1Q16633 256 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PRTGQ2VWP7 1150 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ZNF672Q499Z4 452 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 FGD3Q5JSP0 725 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PXDC1Q5TGL8 231 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ASPHD1Q5U4P2 390 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 RESP18Q5W5W9 173 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ZNF530Q6P9A1 599 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 NAPRTQ6XQN6 538 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 CERS6Q6ZMG9 384 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 NT5DC3Q86UY8 548 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 MYPOPQ86VE0 399 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 TRAPPC5Q8IUR0 188 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 LRRC52Q8N7C0 313 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 TPRX1Q8N7U7 411 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PIGXQ8TBF5 258 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 SERPINB12Q96P63 405 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 NIPSNAP1Q9BPW8 284 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 NIPSNAP3BQ9BS92 247 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ULBP1Q9BZM6 244 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 RNF41Q9H4P4 317 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 GAREM1Q9H706 876 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 CCDC59Q9P031 241 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ZDHHC2Q9UIJ5 367 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PURGQ9UJV8 347 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PILRBQ9UKJ0 227 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 IRAK3Q9Y616 596 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ALKQ9UM73 1620 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 TEX13DA0A0J9YY54 714 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 F8W036 122 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PLPP3O14495 311 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 WNT11O96014 354 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 IGHG4P01861 327 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ABOP16442 354 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 P2RY4P51582 365 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 XGP55808 180 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 SRSF3P84103 164 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 AQP6Q13520 282 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 TRMT5Q32P41 509 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PDZD11Q5EBL8 140 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ACTL10Q5JWF8 245 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 LCLAT1Q6UWP7 414 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 SLC25A48Q6ZT89 311 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 FAM92BQ6ZTR7 304 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 GLCCI1Q86VQ1 547 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 STPG2Q8N412 459 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 OR4D9Q8NGE8 314 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 PIK3R3Q92569 461 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 CREB3L1Q96BA8 519 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 STACQ99469 402 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 SLC38A3Q99624 504 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 TRAF4Q9BUZ4 470 aaPredicted RBP4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 KLHL31Q9H511 634 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 ARMC7Q9H6L4 198 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 CAB39LQ9H9S4 337 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 FGFR1OP2Q9NVK5 253 aa4.58□□□□□ -1.68
ECHDC1-222ENST00000531967 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 ZNF233A6NK53 670 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 LINC00587B1AMM8 73 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 CCRL2O00421 344 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 PLPP1O14494 284 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 CTNSO60931 367 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 NDUFS7O75251 213 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 ANXA9O76027 345 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 SERPINA5P05154 406 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 HBQ1P09105 142 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 CD36P16671 472 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 TCP1P17987 556 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 SERPINB5P36952 375 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 CYB561P49447 251 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 CDK9P50750 372 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 TMEM33P57088 247 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 ST3GAL1Q11201 340 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 FLOT2Q14254 428 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 LTB4RQ15722 352 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 KCNJ8Q15842 424 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 RFTN2Q52LD8 501 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 ACSM3Q53FZ2 586 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 TEX30Q5JUR7 227 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 BTNL3Q6UXE8 466 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 RALGPS2Q86X27 583 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 SLC16A11Q8NCK7 471 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 CCDC54Q8NEL0 328 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 SETD7Q8WTS6 366 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 OR8D1Q8WZ84 308 aa4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 MRPL24Q96A35 216 aaKnown RBP4.57□□□□□ -1.68
ECHDC1-222ENST00000531967 ZBED6CLQ96FA7 236 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms