RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 MNTQ99583 582 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 TLNRD1Q9H1K6 362 aa13.33□□□□□ -0.28
CAPN1-214ENST00000528165 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
CAPN1-214ENST00000528165 OR2W5A6NFC9 320 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 NARSO43776 548 aaKnown RBP13.32□□□□□ -0.28
CAPN1-214ENST00000528165 DNAJB6O75190 326 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 ACTL6AO96019 429 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 FBXO45P0C2W1 286 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 PRKXP51817 358 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 POLR2GP62487 172 aaKnown RBP eCLIP13.32□□□□□ -0.28
CAPN1-214ENST00000528165 NR0B2Q15466 257 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 TSC22D1Q15714 1073 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 INPP5JQ15735 1006 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-214ENST00000528165 SCGB2B2Q4G0G5 96 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 LHX8Q68G74 356 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 ZCCHC12Q6PEW1 402 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 KIRREL2Q6UWL6 708 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 GALNT16Q8N428 558 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 TMEM229BQ8NBD8 167 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 CNTNAP3BQ96NU0 1288 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 TSSK2Q96PF2 358 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 PTDSS2Q9BVG9 487 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 TINAGL1Q9GZM7 467 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-214ENST00000528165 MYOZ1Q9NP98 299 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-214ENST00000528165 POLE3Q9NRF9 147 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 MYEF2Q9P2K5 600 aaKnown RBP13.32□□□□□ -0.28
CAPN1-214ENST00000528165 DAPP1Q9UN19 280 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 A0A087WV62 115 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 LOC100289279A0A1B0GTE1 492 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 OR6C76A6NM76 312 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 TMEM212A6NML5 194 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 OR4C45A6NMZ5 311 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 FAM25EA8MYX2 175 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 C1QTNF3-AMACRE9PGA6 284 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 SULT2B1O00204 365 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 SULT1C2O00338 296 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 MOSPD3O75425 235 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-214ENST00000528165 ITGA5P08648 1049 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 GPR143P51810 404 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 RPS15AP62244 130 aaKnown RBP13.32□□□□□ -0.28
CAPN1-214ENST00000528165 PDZK1IP1Q13113 114 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 C10orf91Q5T1B1 145 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 LINC00114Q6XXX2 140 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF813Q6ZN06 617 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 OR2G2Q8NGZ5 317 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 ULBP3Q9BZM4 244 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 TREM1Q9NP99 234 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 SCN2AQ99250 2005 aa13.32□□□□□ -0.28
CAPN1-214ENST00000528165 EIF3GO75821 320 aaKnown RBP eCLIP13.31□□□□□ -0.28
CAPN1-214ENST00000528165 AKR7A3O95154 331 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 ABHD16AO95870 558 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 RXFP4Q8TDU9 374 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 TSEN15Q8WW01 171 aaKnown RBP13.31□□□□□ -0.28
CAPN1-214ENST00000528165 CRB3Q9BUF7 120 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 LAMP5Q9UJQ1 280 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 FARSAQ9Y285 508 aaKnown RBP13.31□□□□□ -0.28
CAPN1-214ENST00000528165 TICRRQ7Z2Z1 1910 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 TMEM200CA6NKL6 621 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 LINC00587B1AMM8 73 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 FGF16O43320 207 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 CYB5AP00167 134 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 SPTBP11277 2137 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 CDKN2AP42771 156 aaKnown RBP13.31□□□□□ -0.28
CAPN1-214ENST00000528165 NPBWR1P48145 328 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 ISXQ2M1V0 245 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF627Q7L945 461 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 NANPQ8TBE9 248 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 SEH1LQ96EE3 360 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 MBNL1Q9NR56 388 aaKnown RBP13.31□□□□□ -0.28
CAPN1-214ENST00000528165 SLC17A5Q9NRA2 495 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 SLC22A7Q9Y694 548 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF860A6NHJ4 632 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 C4orf47A7E2U8 309 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 GPR89AB7ZAQ6 455 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 RAD1O60671 282 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 ADH1AP07327 375 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 GPR89BP0CG08 455 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 LIPCP11150 499 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 ITGB8P26012 769 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 PRPS1P60891 318 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 SRSF3P84103 164 aaKnown RBP13.31□□□□□ -0.28
CAPN1-214ENST00000528165 HYAL4Q2M3T9 481 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 NDUFAF7Q7L592 441 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 BPIFB2Q8N4F0 458 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 DMBX1Q8NFW5 382 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 GAL3ST1Q99999 423 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 TEX101Q9BY14 249 aa13.31□□□□□ -0.28
CAPN1-214ENST00000528165 ELOA3DA6NLF2 546 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-214ENST00000528165 NUDT19A8MXV4 375 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF736B4DX44 427 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-214ENST00000528165 SGCEO43556 437 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 FGF17O60258 216 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 PBX2P40425 430 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 ELOA3BQ3SY89 546 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 PLEKHN1Q494U1 663 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF550Q7Z398 422 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 CACUL1Q86Y37 369 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 ELOA3Q8NG57 546 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 OR4E2Q8NGC2 313 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms