RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CARTPTQ16568 116 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 SWI5Q1ZZU3 235 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 MST1LQ2TV78 715 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 ALG10Q5BKT4 473 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 LRFN4Q6PJG9 635 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 PIWIL3Q7Z3Z3 882 aaKnown RBP13.46□□□□□ -0.25
CAPN1-213ENST00000527897 SKA3Q8IX90 412 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 NRMQ8IXM6 262 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 OFCC1Q8IZS5 231 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 ANKS4BQ8N8V4 417 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 NOXO1Q8NFA2 376 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 IL17RDQ8NFM7 739 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 ASB10Q8WXI3 467 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 RNF121Q9H920 327 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 ZNF224Q9NZL3 707 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 ABCD2Q9UBJ2 740 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 V9GYQ6 96 aa13.46□□□□□ -0.25
CAPN1-213ENST00000527897 TRAV27A0A087WT01 109 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 SH3PXD2BA1X283 911 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 B9A039 149 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 INAFM1C9JVW0 142 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 hCG_2039718K7EN88 272 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 FFAR1O14842 300 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 IGF2P01344 180 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 OR8G3PP0DMU2 310 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 ACADSP16219 412 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 NPR2P20594 1047 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 MAKP20794 623 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 EFNA4P52798 201 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 PPP2R2BQ00005 443 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 CD47Q08722 323 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 GKAP1Q5VSY0 366 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-213ENST00000527897 GLYATQ6IB77 296 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 ZNF627Q7L945 461 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 RRM2BQ7LG56 351 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 HDDC2Q7Z4H3 204 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 CYP4Z1Q86W10 505 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 SVOPLQ8N434 492 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 FAM156AQ8NDB6 213 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 NUP37Q8NFH4 326 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 OR4K5Q8NGD3 323 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 OR51A7Q8NH64 312 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 FGFBP3Q8TAT2 258 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 FAM168AQ92567 244 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 MCHR2Q969V1 340 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 SORCS2Q96PQ0 1159 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 MAN2C1Q9NTJ4 1040 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 TMEM38BQ9NVV0 291 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 RPS6KA6Q9UK32 745 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 FKBP7Q9Y680 259 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 NAV3Q8IVL0 2385 aa13.45□□□□□ -0.26
CAPN1-213ENST00000527897 EFCAB9A8MZ26 197 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 ENTPD5O75356 428 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 SLC2A10O95528 541 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 ZNF14P17017 642 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-213ENST00000527897 GPR4P46093 362 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 CTXN1P60606 82 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 MXRA7P84157 204 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 GALK2Q01415 458 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 TBPL2Q6SJ96 375 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 DNM1P46Q6ZS02 220 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 SLC16A14Q7RTX9 510 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 OAFQ86UD1 273 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 CDK20Q8IZL9 346 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 LRRC18Q8N456 261 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 OR13C2Q8NGS9 318 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 ACOT11Q8WXI4 607 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-213ENST00000527897 NSMAFQ92636 917 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 DYNLRB1Q9NP97 96 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 HIF3AQ9Y2N7 669 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 ARL2BPQ9Y2Y0 163 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 FAM32AQ9Y421 112 aaKnown RBP13.44□□□□□ -0.26
CAPN1-213ENST00000527897 SPEF1Q9Y4P9 236 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 HIVEP2P31629 2446 aa13.44□□□□□ -0.26
CAPN1-213ENST00000527897 A0A087WUU8 490 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 GPRIN2O60269 458 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 PDE5AO76074 875 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 F12P00748 615 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-213ENST00000527897 CDAP32320 146 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 MSX2P35548 267 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-213ENST00000527897 DSCR9P59020 149 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 FMODQ06828 376 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 TMEM53Q6P2H8 277 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 ZCCHC24Q8N2G6 241 aaKnown RBP13.43□□□□□ -0.26
CAPN1-213ENST00000527897 LIPHQ8WWY8 451 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 HDAC2Q92769 488 aaKnown RBP13.43□□□□□ -0.26
CAPN1-213ENST00000527897 LRRC37BQ96QE4 947 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 TNFRSF13CQ96RJ3 184 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 MRPL13Q9BYD1 178 aaKnown RBP13.43□□□□□ -0.26
CAPN1-213ENST00000527897 OR51B6Q9H340 312 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 TXNIPQ9H3M7 391 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 PLK3Q9H4B4 646 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 ZNF442Q9H7R0 627 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 ARL8BQ9NVJ2 186 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 STX18Q9P2W9 335 aaKnown RBP13.43□□□□□ -0.26
CAPN1-213ENST00000527897 ZNF346Q9UL40 294 aaKnown RBP13.43□□□□□ -0.26
CAPN1-213ENST00000527897 FZR1Q9UM11 496 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 CMAHPQ9Y471 501 aa13.43□□□□□ -0.26
CAPN1-213ENST00000527897 ENPP4Q9Y6X5 453 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms