RNA–Protein interactions for RNA: ENST00000527118.5

RBBP4-218, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-218	ENST00000527118	RBM34	P42696	430 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	CLRN1	P58418	232 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	ZNF584	Q8IVC4	421 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	MICU2	Q8IYU8	434 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	OR2T12	Q8NG77	320 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	TMEM239	Q8WW34	195 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	ZNF347	Q96SE7	839 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	MRPL37	Q9BZE1	423 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	BPESC1	Q9GZL8	116 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	TPK1	Q9H3S4	243 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	FZR1	Q9UM11	496 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118	SPEF1	Q9Y4P9	236 aa		13.46	□□□□□ -0.25
RBBP4-218	ENST00000527118		A0A1W2PRG6	482 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	MCIDAS	D6RGH6	385 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	ERCC1	P07992	297 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	OR8G3P	P0DMU2	310 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	APEH	P13798	732 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	GALK2	Q01415	458 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	SYT14	Q8NB59	555 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	OR4K5	Q8NGD3	323 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	MOSPD2	Q8NHP6	518 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	ASB10	Q8WXI3	467 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	MCHR2	Q969V1	340 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	MRPL24	Q96A35	216 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	SYT3	Q9BQG1	590 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	POLR2J2	Q9GZM3	115 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	POLR2J3	Q9H1A7	115 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	INIP	Q9NRY2	104 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	CMTM6	Q9NX76	183 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	FBXO9	Q9UK97	447 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	MED31	Q9Y3C7	131 aa		13.45	□□□□□ -0.26
RBBP4-218	ENST00000527118	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.44	□□□□□ -0.26	8e-11	■■■■□ 22.1
RBBP4-218	ENST00000527118	ELOVL7	A1L3X0	281 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	LRP5L	A4QPB2	252 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	TRMU	O75648	421 aa	Known RBP	13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	FARS2	O95363	451 aa	Known RBP	13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	STAMBP	O95630	424 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	SERPINA5	P05154	406 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	CCL2	P13500	99 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	ACADS	P16219	412 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	FUT4	P22083	530 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	GLRX	P35754	106 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	YAP1	P46937	504 aa	Known RBP	13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	GZMK	P49863	264 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	FXN	Q16595	210 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	LRP11	Q86VZ4	500 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	ARIH2OS	Q8N7S6	290 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	NOXO1	Q8NFA2	376 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	NEU4	Q8WWR8	484 aa	Predicted RBP	13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	CCDC134	Q9H6E4	229 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	RNF121	Q9H920	327 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	CHODL	Q9H9P2	273 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	MYEF2	Q9P2K5	600 aa	Known RBP	13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	A4GNT	Q9UNA3	340 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	DNHD1	Q96M86	4753 aa		13.44	□□□□□ -0.26
RBBP4-218	ENST00000527118	LYNX1	G3V0Z9	82 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	LMX1B	O60663	402 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	LYNX1	P0DP58	116 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	TCN1	P20061	433 aa	Predicted RBP	13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	ALDH3B1	P43353	468 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	DAP3	P51398	398 aa	Known RBP	13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	SELENOW	P63302	87 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	LAPTM4A	Q15012	233 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	HIST3H3	Q16695	136 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	HSP90B2P	Q58FF3	399 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	PODNL1	Q6PEZ8	512 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	CXXC5	Q7LFL8	322 aa	Known RBP	13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	VTCN1	Q7Z7D3	282 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	MEX3D	Q86XN8	651 aa	Known RBP	13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	LRRC18	Q8N456	261 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	SLC30A7	Q8NEW0	376 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	RP9	Q8TA86	221 aa	Known RBP	13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	UBASH3B	Q8TF42	649 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	MSI2	Q96DH6	328 aa	Known RBP	13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	PRRC1	Q96M27	445 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	SOX7	Q9BT81	388 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	BEX2	Q9BXY8	128 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	MRPL13	Q9BYD1	178 aa	Known RBP	13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	OR51B6	Q9H340	312 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	RHCG	Q9UBD6	479 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	REV1	Q9UBZ9	1251 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	SLC7A8	Q9UHI5	535 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	CDC42EP3	Q9UKI2	254 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	FBXL3	Q9UKT7	428 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	SNX13	Q9Y5W8	968 aa		13.43	□□□□□ -0.26
RBBP4-218	ENST00000527118	LOC100289279	A0A1B0GTE1	492 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118		J3KTA2	159 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118		M0R233	179 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	SLC22A2	O15244	555 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	SYNGR3	O43761	229 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	ENTPD5	O75356	428 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	SLC2A10	O95528	541 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	IGF2	P01344	180 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	IFNA2	P01563	188 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	FAM157B	P0CG42	384 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	THRB	P10828	461 aa		13.42	□□□□□ -0.26
RBBP4-218	ENST00000527118	COX4I1	P13073	169 aa		13.42	□□□□□ -0.26

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