RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CRISP3P54108 245 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 UFM1P61960 85 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 MELKQ14680 651 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 WHAMMP3Q1A5X7 153 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 DEFB112Q30KQ8 113 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 MMEL1Q495T6 779 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 FBLN7Q53RD9 439 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 CEP85LQ5SZL2 805 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 ASPHD2Q6ICH7 369 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 WDR88Q6ZMY6 472 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 KLHL36Q8N4N3 616 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 SYT14Q8NB59 555 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 OR4K5Q8NGD3 323 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 TMEM19Q96HH6 336 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 APOPT1Q96IL0 206 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 TEX37Q96LM6 180 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 C16orf45Q96MC5 204 aaPredicted RBP9.81□□□□□ -0.84
SDCBP-211ENST00000523441 CCDC115Q96NT0 180 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 OR52E6Q96RD3 313 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 DIRC2Q96SL1 478 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 RHOXF2Q9BQY4 288 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 SPATA9Q9BWV2 254 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 EGLN1Q9GZT9 426 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 ARMC7Q9H6L4 198 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 MSL2Q9HCI7 577 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 NKIRAS2Q9NYR9 191 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 OR5V1Q9UGF6 321 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 FBXL3Q9UKT7 428 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 NPTNQ9Y639 398 aa9.81□□□□□ -0.84
SDCBP-211ENST00000523441 IGKV1D-42A0A075B6H8 117 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 A0A1B0GWA3 101 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 CLDN34H7C241 214 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 ITM2AO43736 263 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 ZNF205O95201 554 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 ANP32DO95626 131 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 ADORA3P0DMS8 318 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 CD80P33681 288 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 APLNRP35414 380 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 DSTNP60981 165 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 RELBQ01201 579 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 HSF2Q03933 536 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 PLP2Q04941 152 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 SLC3A1Q07837 685 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 PUDPQ08623 228 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 MOGQ16653 247 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 ALG10BQ5I7T1 473 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 TMEM255AQ5JRV8 349 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 RNF220Q5VTB9 566 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 SLC16A14Q7RTX9 510 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 PIWIL3Q7Z3Z3 882 aaKnown RBP9.8□□□□□ -0.84
SDCBP-211ENST00000523441 IFT20Q8IY31 132 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 ZNF781Q8N8C0 355 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 RBM15BQ8NDT2 890 aaKnown RBP9.8□□□□□ -0.84
SDCBP-211ENST00000523441 SLC38A5Q8WUX1 472 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 PKNOX2Q96KN3 472 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 LRR1Q96L50 414 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 MOGAT1Q96PD6 335 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 CITED1Q99966 193 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 BCL2L14Q9BZR8 327 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 LRMDAQ9H2I8 198 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 DENND2DQ9H6A0 471 aaPredicted RBP9.8□□□□□ -0.84
SDCBP-211ENST00000523441 TCF7L1Q9HCS4 588 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 SLC6A13Q9NSD5 602 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 ASIC5Q9NY37 505 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 C1RLQ9NZP8 487 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 KLHL14Q9P2G3 628 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 BTNL2Q9UIR0 455 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 MMP24Q9Y5R2 645 aa9.8□□□□□ -0.84
SDCBP-211ENST00000523441 CLPSL1A2RUU4 121 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 G3V4G9 280 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 PIN1P1O15428 100 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 OR6A2O95222 327 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 FARS2O95363 451 aaKnown RBP9.79□□□□□ -0.84
SDCBP-211ENST00000523441 KRT75O95678 551 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 IGHV2-70P01814 119 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 HTR2AP28223 471 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 CLNS1AP54105 237 aaKnown RBP9.79□□□□□ -0.84
SDCBP-211ENST00000523441 TNFAIP6P98066 277 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-211ENST00000523441 TAF9Q16594 264 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 ZNF718Q3SXZ3 478 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 ESCO2Q56NI9 601 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 RUNDC3AQ59EK9 446 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 FAM209AQ5JX71 171 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 RUSC1-AS1Q66K80 236 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 SPICQ8N5J4 248 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 HIPK4Q8NE63 616 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 OR10S1Q8NGN2 331 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 OR1J2Q8NGS2 313 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 SLC25A40Q8TBP6 338 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 TCP10LQ8TDR4 215 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 TESCQ96BS2 214 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 CHIAQ9BZP6 476 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 OR2J1Q9GZK6 312 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 PATZ1Q9HBE1 687 aaKnown RBP9.79□□□□□ -0.84
SDCBP-211ENST00000523441 TMEM38BQ9NVV0 291 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 GLTPQ9NZD2 209 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 CALML5Q9NZT1 146 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 SELENONQ9NZV5 590 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 RNF114Q9Y508 228 aa9.79□□□□□ -0.84
SDCBP-211ENST00000523441 PPIAL4EA0A075B759 164 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms