RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SPEF1Q9Y4P9 236 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 CAPN7Q9Y6W3 813 aa17.85■□□□□ 0.45
SDCBP-209ENST00000522243 OR5F1O95221 314 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 IFNA14P01570 189 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 KDELR2P33947 212 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 AQP2P41181 271 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 GZMKP49863 264 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 GALK2Q01415 458 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 GKAP1Q5VSY0 366 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-209ENST00000522243 PODNL1Q6PEZ8 512 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 CXXC5Q7LFL8 322 aaKnown RBP17.84■□□□□ 0.45
SDCBP-209ENST00000522243 ZNF584Q8IVC4 421 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 ARIH2OSQ8N7S6 290 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 OR2T12Q8NG77 320 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 RCN3Q96D15 328 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 SYT3Q9BQG1 590 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 CHODLQ9H9P2 273 aa17.84■□□□□ 0.45
SDCBP-209ENST00000522243 FBXO9Q9UK97 447 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-209ENST00000522243 A0A1W2PRG6 482 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 LRP5LA4QPB2 252 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 MCIDASD6RGH6 385 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 LYNX1G3V0Z9 82 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 PIP5K1CO60331 668 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 LMX1BO60663 402 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 IGHG1P01857 330 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 ERCC1P07992 297 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-209ENST00000522243 LYNX1P0DP58 116 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 TCN1P20061 433 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-209ENST00000522243 GLRXP35754 106 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 RBM34P42696 430 aaKnown RBP17.83■□□□□ 0.44
SDCBP-209ENST00000522243 LRP11Q86VZ4 500 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 MICU2Q8IYU8 434 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 SYT14Q8NB59 555 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 OR4K5Q8NGD3 323 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 MOSPD2Q8NHP6 518 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 ASB10Q8WXI3 467 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 MCHR2Q969V1 340 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 MSI2Q96DH6 328 aaKnown RBP17.83■□□□□ 0.44
SDCBP-209ENST00000522243 BEX2Q9BXY8 128 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 DENND2DQ9H6A0 471 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-209ENST00000522243 RNF121Q9H920 327 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 INIPQ9NRY2 104 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 MED31Q9Y3C7 131 aa17.83■□□□□ 0.44
SDCBP-209ENST00000522243 MALRD1Q5VYJ5 2156 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 LOC100289279A0A1B0GTE1 492 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 TRMUO75648 421 aaKnown RBP17.82■□□□□ 0.44
SDCBP-209ENST00000522243 FARS2O95363 451 aaKnown RBP17.82■□□□□ 0.44
SDCBP-209ENST00000522243 IFNA2P01563 188 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 SERPINA5P05154 406 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 CCL2P13500 99 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 YAP1P46937 504 aaKnown RBP17.82■□□□□ 0.44
SDCBP-209ENST00000522243 SEC24CP53992 1094 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 NOXO1Q8NFA2 376 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 UBASH3BQ8TF42 649 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 POLR2J2Q9GZM3 115 aaKnown RBP17.82■□□□□ 0.44
SDCBP-209ENST00000522243 POLR2J3Q9H1A7 115 aaKnown RBP17.82■□□□□ 0.44
SDCBP-209ENST00000522243 OR51B6Q9H340 312 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 CMTM6Q9NX76 183 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 MYEF2Q9P2K5 600 aaKnown RBP17.82■□□□□ 0.44
SDCBP-209ENST00000522243 CDC42EP3Q9UKI2 254 aa17.82■□□□□ 0.44
SDCBP-209ENST00000522243 ELOVL7A1L3X0 281 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 M0R233 179 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 SYNGR3O43761 229 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 FAM157BP0CG42 384 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 FAM157CP0CG43 387 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 ACADSP16219 412 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 ZNF23P17027 643 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 FUT4P22083 530 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 LSP1P33241 339 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 ALDH3B1P43353 468 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 SELENOWP63302 87 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 LAPTM4AQ15012 233 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 MAD2L1BPQ15013 274 aaPredicted RBP17.81■□□□□ 0.44
SDCBP-209ENST00000522243 FXNQ16595 210 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 FAM166AQ6J272 317 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 IL17RELQ6ZVW7 336 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 ZNF540Q8NDQ6 660 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 SOX7Q9BT81 388 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 MRPL13Q9BYD1 178 aaKnown RBP17.81■□□□□ 0.44
SDCBP-209ENST00000522243 SHARPINQ9H0F6 387 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 TMEM160Q9NX00 188 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 REV1Q9UBZ9 1251 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 FBXL3Q9UKT7 428 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 KCNS2Q9ULS6 477 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 RTTNQ86VV8 2226 aa17.81■□□□□ 0.44
SDCBP-209ENST00000522243 IGFBP5P24593 272 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 ZNF84P51523 738 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 HIST3H3Q16695 136 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 TMEM53Q6P2H8 277 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 SLC16A14Q7RTX9 510 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 MEX3DQ86XN8 651 aaKnown RBP17.8■□□□□ 0.44
SDCBP-209ENST00000522243 ZNF786Q8N393 782 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 LRRC18Q8N456 261 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 PAQR4Q8N4S7 273 aaPredicted RBP17.8■□□□□ 0.44
SDCBP-209ENST00000522243 SLC30A7Q8NEW0 376 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 HDAC2Q92769 488 aaKnown RBP17.8■□□□□ 0.44
SDCBP-209ENST00000522243 CCDC134Q9H6E4 229 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 RHCGQ9UBD6 479 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 SLC7A8Q9UHI5 535 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 DUSP13Q9UII6 198 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms