RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CT55Q8WUE5 264 aa23.83■■□□□ 1.41
COL13A1-210ENST00000517713 RALGAPA1Q6GYQ0 2036 aa23.83■■□□□ 1.41
COL13A1-210ENST00000517713 MLF1P58340 268 aa23.83■■□□□ 1.4
COL13A1-210ENST00000517713 POU3F1Q03052 451 aaPredicted RBP23.83■■□□□ 1.4
COL13A1-210ENST00000517713 PPP1R32Q7Z5V6 425 aa23.83■■□□□ 1.4
COL13A1-210ENST00000517713 PLCZ1Q86YW0 608 aa23.83■■□□□ 1.4
COL13A1-210ENST00000517713 DND1Q8IYX4 353 aaKnown RBP23.83■■□□□ 1.4
COL13A1-210ENST00000517713 MAP6Q96JE9 813 aa23.83■■□□□ 1.4
COL13A1-210ENST00000517713 DDA1Q9BW61 102 aa23.83■■□□□ 1.4
COL13A1-210ENST00000517713 ANGPTL4Q9BY76 406 aa23.83■■□□□ 1.4
COL13A1-210ENST00000517713 PPP1R3EQ9H7J1 279 aa23.83■■□□□ 1.4
COL13A1-210ENST00000517713 MRPL22Q9NWU5 206 aaKnown RBP23.83■■□□□ 1.4
COL13A1-210ENST00000517713 ING1Q9UK53 422 aaPredicted RBP23.83■■□□□ 1.4
COL13A1-210ENST00000517713 A0A1W2PQ09 198 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 FAM25AB3EWG3 89 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 FAM25CB3EWG5 89 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 FAM25GB3EWG6 89 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 MASP2O00187 686 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 FZD7O75084 574 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 CSF3P09919 207 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 PTBP1P26599 531 aaKnown RBP eCLIP23.82■■□□□ 1.4
COL13A1-210ENST00000517713 OTX2P32243 289 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 EIF1P41567 113 aaKnown RBP23.82■■□□□ 1.4
COL13A1-210ENST00000517713 SCN1BQ07699 218 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 SLC25A35Q3KQZ1 300 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 HSD17B12Q53GQ0 312 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 TMEM156Q8N614 296 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 TMEM185BQ9H7F4 350 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 FANCFQ9NPI8 374 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 FRRS1LQ9P0K9 344 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 MALT1Q9UDY8 824 aa23.82■■□□□ 1.4
COL13A1-210ENST00000517713 ZNF879B4DU55 563 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 OPN1LWP04000 364 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 RAB40ALP0C0E4 278 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 CCL3P10147 92 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 ELK1P19419 428 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 APEX1P27695 318 aaKnown RBP23.81■■□□□ 1.4
COL13A1-210ENST00000517713 ADH6P28332 368 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 OTPQ5XKR4 325 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 FAM205BPQ63HN1 556 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 CADM3Q8N126 398 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 OR5AK2Q8NH90 309 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 ASB17Q8WXJ9 295 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 RGP1Q92546 391 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-210ENST00000517713 AMELYQ99218 206 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 SMAD5Q99717 465 aaKnown RBP23.81■■□□□ 1.4
COL13A1-210ENST00000517713 NOX4Q9NPH5 578 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 HSPB2A8KAH6 182 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 RANBP1P43487 201 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 GLO1Q04760 184 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 C19orf57Q0VDD7 668 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 IL18Q14116 193 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 HSPB2Q16082 182 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 CCBE1Q6UXH8 406 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-210ENST00000517713 LRRC69Q6ZNQ3 347 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-210ENST00000517713 PAQR8Q8TEZ7 354 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 NSMAFQ92636 917 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 ZBTB8AQ96BR9 441 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 LIN37Q96GY3 246 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-210ENST00000517713 NEURL2Q9BR09 285 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 MFRPQ9BY79 579 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 SLCO1C1Q9NYB5 712 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 COA3Q9Y2R0 106 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-210ENST00000517713 BDP1A6H8Y1 2624 aa23.81■■□□□ 1.4
COL13A1-210ENST00000517713 A0A1W2PNV4 684 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 NOTOA8MTQ0 251 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 CENPBD1B2RD01 187 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 SLC2A2P11168 524 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-210ENST00000517713 ADAM8P78325 824 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 CEP78Q5JTW2 689 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 ARMC10Q8N2F6 343 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 TXNDC15Q96J42 360 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 OR5B2Q96R09 309 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 KCNK17Q96T54 332 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 SH2D2AQ9NP31 389 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 B3GAT2Q9NPZ5 323 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 HPF1Q9NWY4 346 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 MED29Q9NX70 200 aa23.8■■□□□ 1.4
COL13A1-210ENST00000517713 FARSAQ9Y285 508 aaKnown RBP23.8■■□□□ 1.4
COL13A1-210ENST00000517713 WDFY3Q8IZQ1 3526 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 A0A087WZY1 265 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 SPARCP09486 303 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 ICAM2P13598 275 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 SELENBP1Q13228 472 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 SSPNQ14714 243 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 P2RY14Q15391 338 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 SLC22A10Q63ZE4 541 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 SLC18B1Q6NT16 456 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 DNM1P34Q6PK57 102 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 SYT9Q86SS6 491 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 LRRC28Q86X40 367 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-210ENST00000517713 WDFY1Q8IWB7 410 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 SLC25A43Q8WUT9 341 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-210ENST00000517713 UBL7Q96S82 380 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-210ENST00000517713 ZCCHC4Q9H5U6 513 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 A0A087WV48 116 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 PIN1P1O15428 100 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 SRMP19623 302 aa23.79■■□□□ 1.4
COL13A1-210ENST00000517713 FKBP2P26885 142 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms