RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 GLB1L3Q8NCI6 653 aaPredicted RBP13.95□□□□□ -0.18
VIM-208ENST00000497849 VPS33AQ96AX1 596 aa13.95□□□□□ -0.18
VIM-208ENST00000497849 TESCQ96BS2 214 aa13.95□□□□□ -0.18
VIM-208ENST00000497849 TIMD4Q96H15 378 aa13.95□□□□□ -0.18
VIM-208ENST00000497849 MTHFD2LQ9H903 347 aaPredicted RBP13.95□□□□□ -0.18
VIM-208ENST00000497849 CCDC167Q9P0B6 97 aa13.95□□□□□ -0.18
VIM-208ENST00000497849 TRIM33Q9UPN9 1127 aa13.95□□□□□ -0.18
VIM-208ENST00000497849 AUP1Q9Y679 476 aa13.95□□□□□ -0.18
VIM-208ENST00000497849 TANC2Q9HCD6 1990 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 TRAPPC2LH3BP13 241 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 M0QZ24 198 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 KNG1P01042 644 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 PATE4P0C8F1 98 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 FAM157BP0CG42 384 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 MRPL19P49406 292 aaKnown RBP13.94□□□□□ -0.18
VIM-208ENST00000497849 KLF3P57682 345 aaPredicted RBP13.94□□□□□ -0.18
VIM-208ENST00000497849 ERVS71-1P61550 626 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 COPZ1P61923 177 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 ZNF154Q13106 437 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 C1DQ13901 141 aaKnown RBP13.94□□□□□ -0.18
VIM-208ENST00000497849 GNA13Q14344 377 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 CARD17Q5XLA6 110 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 C16orf87Q6PH81 154 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 ZNF836Q6ZNA1 936 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 C17orf107Q6ZR85 190 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 PAQR4Q8N4S7 273 aaPredicted RBP13.94□□□□□ -0.18
VIM-208ENST00000497849 BHLHE22Q8NFJ8 381 aaPredicted RBP13.94□□□□□ -0.18
VIM-208ENST00000497849 FGFBP3Q8TAT2 258 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 SYNPRQ8TBG9 265 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 KTI12Q96EK9 354 aaPredicted RBP13.94□□□□□ -0.18
VIM-208ENST00000497849 OR52E6Q96RD3 313 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 DENND2DQ9H6A0 471 aaPredicted RBP13.94□□□□□ -0.18
VIM-208ENST00000497849 DECR2Q9NUI1 292 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 UBAP1Q9NZ09 502 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 GPR160Q9UJ42 338 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 PRDM4Q9UKN5 801 aa13.94□□□□□ -0.18
VIM-208ENST00000497849 PRSS51A0A1B0GVH4 220 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 M0R082 166 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 FOXH1O75593 365 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 SERPINA5P05154 406 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 MAKP20794 623 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 CDKN2CP42773 168 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 KRTAP10-3P60369 221 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 KLF10Q13118 480 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 MAPK11Q15759 364 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 TSTQ16762 297 aaKnown RBP13.93□□□□□ -0.18
VIM-208ENST00000497849 BLOC1S3Q6QNY0 202 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 JAZF1Q86VZ6 243 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 RNF130Q86XS8 419 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 VRK2Q86Y07 508 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 ZNF417Q8TAU3 575 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 ST7LQ8TDW4 575 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 ZNF587Q96SQ5 575 aaPredicted RBP13.93□□□□□ -0.18
VIM-208ENST00000497849 SLC35A5Q9BS91 424 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 EMC6Q9BV81 110 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 SAP30LQ9HAJ7 183 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 SLCO1C1Q9NYB5 712 aa13.93□□□□□ -0.18
VIM-208ENST00000497849 TESQ9UGI8 421 aaKnown RBP13.93□□□□□ -0.18
VIM-208ENST00000497849 A0A1B0GUS0 222 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 LOC102725191A0A1B0GVB3 256 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 SLC22A23A1A5C7 686 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 ISPDA4D126 451 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 TPD52L2O43399 206 aaKnown RBP13.92□□□□□ -0.18
VIM-208ENST00000497849 AKAP8O43823 692 aaKnown RBP13.92□□□□□ -0.18
VIM-208ENST00000497849 CCDC22O60826 627 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 UBL3O95164 117 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 GPANK1O95872 356 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 HPRP00739 348 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 HLA-DOBP13765 273 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 ZNF12P17014 697 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 GTF2E2P29084 291 aaKnown RBP13.92□□□□□ -0.18
VIM-208ENST00000497849 CHI3L1P36222 383 aaPredicted RBP13.92□□□□□ -0.18
VIM-208ENST00000497849 SELENOVP59797 346 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 ZSCAN26Q16670 478 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 ANXA8L1Q5VT79 327 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 ASPHD2Q6ICH7 369 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 BRICD5Q6PL45 260 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 SLC2A7Q6PXP3 512 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 TRPM8Q7Z2W7 1104 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 SKA3Q8IX90 412 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 CCL17Q92583 94 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 SPDL1Q96EA4 605 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 LRR1Q96L50 414 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 FOXB1Q99853 325 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 RBM4BQ9BQ04 359 aaKnown RBP13.92□□□□□ -0.18
VIM-208ENST00000497849 MS4A7Q9GZW8 240 aaPredicted RBP13.92□□□□□ -0.18
VIM-208ENST00000497849 OR51B6Q9H340 312 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 FBXL3Q9UKT7 428 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 POFUT2Q9Y2G5 429 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 POLR3KQ9Y2Y1 108 aaPredicted RBP13.92□□□□□ -0.18
VIM-208ENST00000497849 CHST2Q9Y4C5 530 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 INSIG2Q9Y5U4 225 aa13.92□□□□□ -0.18
VIM-208ENST00000497849 MS4A18H0YCH9 400 aa13.91□□□□□ -0.18
VIM-208ENST00000497849 AIM2O14862 343 aa13.91□□□□□ -0.18
VIM-208ENST00000497849 UBOX5O94941 541 aa13.91□□□□□ -0.18
VIM-208ENST00000497849 IGHMP01871 453 aa13.91□□□□□ -0.18
VIM-208ENST00000497849 IL6P05231 212 aa13.91□□□□□ -0.18
VIM-208ENST00000497849 IGHV4-38-2P0DP08 117 aa13.91□□□□□ -0.18
VIM-208ENST00000497849 CCL2P13500 99 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms