RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 MICU2Q8IYU8 434 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 SYT14Q8NB59 555 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 OR2T12Q8NG77 320 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 OR4K5Q8NGD3 323 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 MOSPD2Q8NHP6 518 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 NEU4Q8WWR8 484 aaPredicted RBP10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 MCHR2Q969V1 340 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 RCN3Q96D15 328 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 ZNF347Q96SE7 839 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 SYT3Q9BQG1 590 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 MRPL37Q9BZE1 423 aaKnown RBP10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 BPESC1Q9GZL8 116 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 TPK1Q9H3S4 243 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 DENND2DQ9H6A0 471 aaPredicted RBP10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 MYOZ1Q9NP98 299 aaPredicted RBP10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 TMEM38BQ9NVV0 291 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 GMPR2Q9P2T1 348 aaKnown RBP10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 FBXO9Q9UK97 447 aaPredicted RBP10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 FZR1Q9UM11 496 aa10.29□□□□□ -0.76
CCHCR1-215ENST00000488920 LOC100289279A0A1B0GTE1 492 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 ELOVL7A1L3X0 281 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 MCIDASD6RGH6 385 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 LYNX1G3V0Z9 82 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 IFNA2P01563 188 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 SERPINA5P05154 406 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 LYNX1P0DP58 116 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 APEHP13798 732 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 TCN1P20061 433 aaPredicted RBP10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 FUT4P22083 530 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 YAP1P46937 504 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 GZMKP49863 264 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 GALK2Q01415 458 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 LRP11Q86VZ4 500 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 ZNF584Q8IVC4 421 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 ARIH2OSQ8N7S6 290 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 ZNF540Q8NDQ6 660 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 UBASH3BQ8TF42 649 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 MRPL24Q96A35 216 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 MSI2Q96DH6 328 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 BEX2Q9BXY8 128 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 MRPL13Q9BYD1 178 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 POLR2J2Q9GZM3 115 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 POLR2J3Q9H1A7 115 aaKnown RBP10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 RNF121Q9H920 327 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 INIPQ9NRY2 104 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 CMTM6Q9NX76 183 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 REV1Q9UBZ9 1251 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 CDC42EP3Q9UKI2 254 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 MED31Q9Y3C7 131 aa10.28□□□□□ -0.76
CCHCR1-215ENST00000488920 ARFGEF3Q5TH69 2177 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 LRP5LA4QPB2 252 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 SYNGR3O43761 229 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 PIP5K1CO60331 668 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 LMX1BO60663 402 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 ENTPD5O75356 428 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 TRMUO75648 421 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 FARS2O95363 451 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 THRBP10828 461 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 CCL2P13500 99 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 ACADSP16219 412 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF23P17027 643 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 LSP1P33241 339 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 GLRXP35754 106 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 ALDH3B1P43353 468 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 EVX1P49640 407 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 DAP3P51398 398 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 SEC24CP53992 1094 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 SELENOWP63302 87 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 FXNQ16595 210 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 HIST3H3Q16695 136 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 HSP90B2PQ58FF3 399 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 TMEM53Q6P2H8 277 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 PODNL1Q6PEZ8 512 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 CXXC5Q7LFL8 322 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 VTCN1Q7Z7D3 282 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 MEX3DQ86XN8 651 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC15A3Q8IY34 581 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF786Q8N393 782 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 LRRC18Q8N456 261 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 PAQR4Q8N4S7 273 aaPredicted RBP10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC30A7Q8NEW0 376 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 ASB10Q8WXI3 467 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 CCDC134Q9H6E4 229 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 CHODLQ9H9P2 273 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 MYEF2Q9P2K5 600 aaKnown RBP10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 RHCGQ9UBD6 479 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 DUSP13Q9UII6 198 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 FBXL3Q9UKT7 428 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 A4GNTQ9UNA3 340 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 SNX13Q9Y5W8 968 aa10.27□□□□□ -0.77
CCHCR1-215ENST00000488920 M0R233 179 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC22A2O15244 555 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 TGFAP01135 160 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 IGF2P01344 180 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 FAM157BP0CG42 384 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 FAM157CP0CG43 387 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 COX4I1P13073 169 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 IFI30P13284 250 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 GIFP27352 417 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 CDAP32320 146 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms