RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 FBXL3Q9UKT7 428 aa10.47□□□□□ -0.73
VPS16-208ENST00000487461 WNT9BO14905 357 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 BCL10O95999 233 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 HIST1H2ABP04908 130 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 QDPRP09417 244 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 PGA4P0DJD7 388 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 PGA3P0DJD8 388 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 NAT2P11245 290 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 CCL2P13500 99 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 PCGF2P35227 344 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 RPS23P62266 143 aaKnown RBP10.46□□□□□ -0.73
VPS16-208ENST00000487461 RUNX1T1Q06455 604 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 GABPB1Q06547 395 aaPredicted RBP10.46□□□□□ -0.73
VPS16-208ENST00000487461 CCDC80Q76M96 950 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 HIST3H2AQ7L7L0 130 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 SLC30A8Q8IWU4 369 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 HIST1H2ACQ93077 130 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 MPP4Q96JB8 637 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 MAGEB18Q96M61 343 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 SLC19A3Q9BZV2 496 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 RACGAP1Q9H0H5 632 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 PCDHAC1Q9H158 963 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 MEPEQ9NQ76 525 aaPredicted RBP10.46□□□□□ -0.73
VPS16-208ENST00000487461 SLC7A8Q9UHI5 535 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 ZNF229Q9UJW7 825 aa10.46□□□□□ -0.73
VPS16-208ENST00000487461 BLOC1S5-TXNDC5H3BN57 136 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 FBP2O00757 339 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 NCR1O76036 304 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 CLPTM1O96005 669 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 FAM157BP0CG42 384 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 UMPSP11172 480 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 LSP1P33241 339 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 SRP14P37108 136 aaKnown RBP10.45□□□□□ -0.74
VPS16-208ENST00000487461 GPR6P46095 362 aaPredicted RBP10.45□□□□□ -0.74
VPS16-208ENST00000487461 DVL1P1P54792 670 aaPredicted RBP10.45□□□□□ -0.74
VPS16-208ENST00000487461 TMEM33P57088 247 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 MYBPC1Q00872 1141 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 HIST3H3Q16695 136 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 VMACQ2NL98 169 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 ALKBH6Q3KRA9 238 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 LIPNQ5VXI9 398 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 NANOGP8Q6NSW7 305 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 UGT2A3Q6UWM9 527 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 SLC30A7Q8NEW0 376 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 OR4K5Q8NGD3 323 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 CLDND2Q8NHS1 167 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 SLC26A7Q8TE54 656 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 MCHR2Q969V1 340 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 ZNF347Q96SE7 839 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 MRPL13Q9BYD1 178 aaKnown RBP10.45□□□□□ -0.74
VPS16-208ENST00000487461 NARFLQ9H6Q4 476 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 RNF121Q9H920 327 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 NANOGQ9H9S0 305 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 NPHS2Q9NP85 383 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 ZNF275Q9NSD4 429 aaPredicted RBP10.45□□□□□ -0.74
VPS16-208ENST00000487461 TAAR3PQ9P1P4 343 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 TRIM33Q9UPN9 1127 aa10.45□□□□□ -0.74
VPS16-208ENST00000487461 A0A1W2PPW3 197 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 B4DSR2 109 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 FAM157AC9JC47 383 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 EDF1O60869 148 aaKnown RBP10.44□□□□□ -0.74
VPS16-208ENST00000487461 ENTPD5O75356 428 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 TRMUO75648 421 aaKnown RBP10.44□□□□□ -0.74
VPS16-208ENST00000487461 FARS2O95363 451 aaKnown RBP10.44□□□□□ -0.74
VPS16-208ENST00000487461 IGHG1P01857 330 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 F13BP05160 661 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 FUT1P19526 365 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 TNFRSF1BP20333 461 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 ACHEP22303 614 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 MAGEB1P43366 347 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 UGT2B15P54855 530 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 CLRN1P58418 232 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 ERVS71-1P61550 626 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 RPL18Q07020 188 aaKnown RBP10.44□□□□□ -0.74
VPS16-208ENST00000487461 RABL3Q5HYI8 236 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 INTS11Q5TA45 600 aaKnown RBP10.44□□□□□ -0.74
VPS16-208ENST00000487461 REP15Q6BDI9 236 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 RGS7BPQ6MZT1 257 aaPredicted RBP10.44□□□□□ -0.74
VPS16-208ENST00000487461 TMEM53Q6P2H8 277 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 SLC16A14Q7RTX9 510 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 NANOGNBQ7Z5D8 188 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 CALHM3Q86XJ0 350 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 NKAIN4Q8IVV8 208 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 RFLNBQ8N5W9 214 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 SYT14Q8NB59 555 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 PFN4Q8NHR9 129 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 TSPAN32Q96QS1 320 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 SEPHS2Q99611 448 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 OR51B6Q9H340 312 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 TREM2Q9NZC2 230 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 ZNF346Q9UL40 294 aaKnown RBP10.44□□□□□ -0.74
VPS16-208ENST00000487461 SH3GLB1Q9Y371 365 aa10.44□□□□□ -0.74
VPS16-208ENST00000487461 A0A0G2JND7 137 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 SLC22A23A1A5C7 686 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 HMGB1P1B2RPK0 211 aaPredicted RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 PPIHO43447 177 aaKnown RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 TCF21O43680 179 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 SHOX2O60902 331 aaPredicted RBP10.43□□□□□ -0.74
VPS16-208ENST00000487461 RP2O75695 350 aa10.43□□□□□ -0.74
VPS16-208ENST00000487461 OR7A10O76100 309 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms