RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 hCG_2039718K7EN88 272 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 NDUFAB1O14561 156 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 TRMUO75648 421 aaKnown RBP15.29■□□□□ 0.04
COL6A1-204ENST00000486023 UBL3O95164 117 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 OR8G3PP0DMU2 310 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 ACADSP16219 412 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 NPR2P20594 1047 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 MAKP20794 623 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 DAP3P51398 398 aaKnown RBP15.29■□□□□ 0.04
COL6A1-204ENST00000486023 ZNF84P51523 738 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 EFNA4P52798 201 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 ALG10Q5BKT4 473 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 GKAP1Q5VSY0 366 aaPredicted RBP15.29■□□□□ 0.04
COL6A1-204ENST00000486023 GLYATQ6IB77 296 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 ZNF730Q6ZMV8 503 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 RRM2BQ7LG56 351 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 PIWIL3Q7Z3Z3 882 aaKnown RBP15.29■□□□□ 0.04
COL6A1-204ENST00000486023 SVOPLQ8N434 492 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 LRRC18Q8N456 261 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 FAM156AQ8NDB6 213 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 OR4K5Q8NGD3 323 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 FGFBP3Q8TAT2 258 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 ASB10Q8WXI3 467 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 NSMAFQ92636 917 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 TMEM38BQ9NVV0 291 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 V9GYQ6 96 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 PLCE1Q9P212 2302 aa15.29■□□□□ 0.04
COL6A1-204ENST00000486023 TRAV27A0A087WT01 109 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 EFCAB9A8MZ26 197 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 FFAR1O14842 300 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 GPRIN2O60269 458 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 FARS2O95363 451 aaKnown RBP15.28■□□□□ 0.04
COL6A1-204ENST00000486023 SLC2A10O95528 541 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 F12P00748 615 aaPredicted RBP15.28■□□□□ 0.04
COL6A1-204ENST00000486023 MSX2P35548 267 aaPredicted RBP15.28■□□□□ 0.04
COL6A1-204ENST00000486023 CTXN1P60606 82 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 GALK2Q01415 458 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 CD47Q08722 323 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 CYP4Z1Q86W10 505 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 CDK20Q8IZL9 346 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 OFCC1Q8IZS5 231 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 ZCCHC24Q8N2G6 241 aaKnown RBP15.28■□□□□ 0.04
COL6A1-204ENST00000486023 NUP37Q8NFH4 326 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 IL17RDQ8NFM7 739 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 FAM168AQ92567 244 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 SORCS2Q96PQ0 1159 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 TNFRSF13CQ96RJ3 184 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 OR51B6Q9H340 312 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 PLK3Q9H4B4 646 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 SPAG4Q9NPE6 437 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 ZNF224Q9NZL3 707 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 FZR1Q9UM11 496 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 FAM32AQ9Y421 112 aaKnown RBP15.28■□□□□ 0.04
COL6A1-204ENST00000486023 SPEF1Q9Y4P9 236 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 CSPG4Q6UVK1 2322 aa15.28■□□□□ 0.04
COL6A1-204ENST00000486023 CCL2P13500 99 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 PRDX6P30041 224 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 CDAP32320 146 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 GPR4P46093 362 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 DSCR9P59020 149 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 MXRA7P84157 204 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 FMODQ06828 376 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 SGCAQ16586 387 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 DNM1P46Q6ZS02 220 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 ZNF627Q7L945 461 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 SLC16A14Q7RTX9 510 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 OAFQ86UD1 273 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 NOXO1Q8NFA2 376 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 HDAC2Q92769 488 aaKnown RBP15.27■□□□□ 0.04
COL6A1-204ENST00000486023 DYNLRB1Q9NP97 96 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 MAN2C1Q9NTJ4 1040 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 RPS6KA6Q9UK32 745 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 ZNF346Q9UL40 294 aaKnown RBP15.27■□□□□ 0.04
COL6A1-204ENST00000486023 CMAHPQ9Y471 501 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 FKBP7Q9Y680 259 aa15.27■□□□□ 0.04
COL6A1-204ENST00000486023 TLN2Q9Y4G6 2542 aa15.27■□□□□ 0.03
COL6A1-204ENST00000486023 A0A087WUU8 490 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 DIRAS1O95057 198 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 ZNF14P17017 642 aaPredicted RBP15.26■□□□□ 0.03
COL6A1-204ENST00000486023 NR4A1P22736 598 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 RPL4P36578 427 aaKnown RBP15.26■□□□□ 0.03
COL6A1-204ENST00000486023 PRKCDQ05655 676 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 FGD3Q5JSP0 725 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 TMEM53Q6P2H8 277 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 HDDC2Q7Z4H3 204 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 CLDN22Q8N7P3 220 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 OR10H5Q8NGA6 315 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 OR13C2Q8NGS9 318 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 ACOT11Q8WXI4 607 aaPredicted RBP15.26■□□□□ 0.03
COL6A1-204ENST00000486023 LRRC37BQ96QE4 947 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 MRPL13Q9BYD1 178 aaKnown RBP15.26■□□□□ 0.03
COL6A1-204ENST00000486023 KCNN2Q9H2S1 579 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 TXNIPQ9H3M7 391 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 YAE1D1Q9NRH1 226 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 ARL8BQ9NVJ2 186 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 ABCD2Q9UBJ2 740 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 ARL2BPQ9Y2Y0 163 aa15.26■□□□□ 0.03
COL6A1-204ENST00000486023 ENTPD5O75356 428 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 IGF2P01344 180 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 ADRA2AP08913 450 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms