RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 IFI44LQ53G44 452 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 SAMD4BQ5PRF9 694 aaKnown RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 C10orf128Q5T292 105 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 C9orf135Q5VTT2 229 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 C11orf71Q6IPW1 123 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 PPP4R4Q6NUP7 873 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 ANKRD16Q6P6B7 361 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 TTC33Q6PID6 262 aaPredicted RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 PRSS57Q6UWY2 283 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 CASP12Q6UXS9 341 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 ZNF704Q6ZNC4 412 aaPredicted RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 RINLQ6ZS11 566 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 FOXL2NBQ6ZUU3 175 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 MBOAT2Q6ZWT7 520 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 TUBA1AQ71U36 451 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 NLRC3Q7RTR2 1065 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 FAM122BQ7Z309 247 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 GPAT4Q86UL3 456 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 CCDC36Q8IYA8 594 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 KBTBD8Q8NFY9 601 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 SLC26A7Q8TE54 656 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 TMEM239Q8WW34 195 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 ACOT11Q8WXI4 607 aaPredicted RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 LZICQ8WZA0 190 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 SLC25A36Q96CQ1 311 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 SLC7A6OSQ96CW6 309 aaPredicted RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 SLC25A44Q96H78 314 aaPredicted RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 ZC3HAV1LQ96H79 300 aaKnown RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 NSL1Q96IY1 281 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 RADILQ96JH8 1075 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 CLPTM1LQ96KA5 538 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 ADAD1Q96M93 576 aaKnown RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 CDRT15Q96T59 188 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 KCTD14Q9BQ13 255 aaPredicted RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 GPR35Q9HC97 309 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 IL1RAPQ9NPH3 570 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 NANSQ9NR45 359 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 CCM2LQ9NUG4 571 aaPredicted RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 BEX4Q9NWD9 120 aaPredicted RBP4.98□□□□□ -1.61
CUX1-208ENST00000485792 MED29Q9NX70 200 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 NDE1Q9NXR1 346 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 ACTR3BQ9P1U1 418 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 RHCGQ9UBD6 479 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 RPS6KA6Q9UK32 745 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 SLC13A4Q9UKG4 626 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 PLEKHA6Q9Y2H5 1048 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 ARHGAP32A7KAX9 2087 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 DSCAML1Q8TD84 2053 aa4.98□□□□□ -1.61
CUX1-208ENST00000485792 A0A096LNT2 108 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 B2RBV5 119 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 ZNF587BE7ETH6 402 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 KPNA4O00629 521 aaPredicted RBP4.97□□□□□ -1.61
CUX1-208ENST00000485792 ARPC2O15144 300 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 MGRN1O60291 552 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 NDUFS7O75251 213 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 RAD51DO75771 328 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 DIRAS1O95057 198 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 CH25HO95992 272 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 SCG5P05408 212 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 SOD3P08294 240 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 ZNF14P17017 642 aaPredicted RBP4.97□□□□□ -1.61
CUX1-208ENST00000485792 CALB2P22676 271 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 IL32P24001 234 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 CD40P25942 277 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 OMPP47874 163 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 SLC9A3P48764 834 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 NCALDP61601 193 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 ADAM8P78325 824 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 TGFBR3Q03167 851 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 RPL18Q07020 188 aaKnown RBP4.97□□□□□ -1.61
CUX1-208ENST00000485792 PMS2P3Q13401 168 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 TRIM25Q14258 630 aaKnown RBP4.97□□□□□ -1.61
CUX1-208ENST00000485792 MELKQ14680 651 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 TRAM2Q15035 370 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 TAF11Q15544 211 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 MST1LQ2TV78 715 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 DEFB113Q30KQ7 82 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 TBRG1Q3YBR2 411 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 LRRC23Q53EV4 343 aaPredicted RBP4.97□□□□□ -1.61
CUX1-208ENST00000485792 HIKESHIQ53FT3 197 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 OTPQ5XKR4 325 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 FBXW10Q5XX13 1052 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 ZNF770Q6IQ21 691 aaPredicted RBP4.97□□□□□ -1.61
CUX1-208ENST00000485792 LCN8Q6JVE9 175 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 NIPAL3Q6P499 406 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 TBPL2Q6SJ96 375 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 C16orf89Q6UX73 402 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 SLC35D2Q76EJ3 337 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 ABHD12BQ7Z5M8 362 aaPredicted RBP4.97□□□□□ -1.61
CUX1-208ENST00000485792 TMEM200AQ86VY9 491 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 UEVLDQ8IX04 471 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 DEFB107AQ8IZN7 70 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 CIARTQ8N365 385 aaPredicted RBP4.97□□□□□ -1.61
CUX1-208ENST00000485792 CCDC197Q8NCU1 140 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 WFDC11Q8NEX6 87 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 MOSPD2Q8NHP6 518 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 ZNF519Q8TB69 540 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 ASB10Q8WXI3 467 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 PIGTQ969N2 578 aa4.97□□□□□ -1.61
CUX1-208ENST00000485792 BPIFA2Q96DR5 249 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms