RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SELENONQ9NZV5 590 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 LEF1Q9UJU2 399 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-207ENST00000475549 SLC13A4Q9UKG4 626 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 CMAHPQ9Y471 501 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 ARFGEF3Q5TH69 2177 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 A0A0G2JND7 137 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 TRAPPC13A5PLN9 417 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 VSTM5A8MXK1 200 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 FAM157AC9JC47 383 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 BLOC1S5-TXNDC5H3BN57 136 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 ANGPT2O15123 496 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 DHHO43323 396 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 RNF13O43567 381 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 SYNGR3O43761 229 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 AKAP8O43823 692 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 EDF1O60869 148 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 SHOX2O60902 331 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 RP2O75695 350 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 SASH3O75995 380 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 UBL3O95164 117 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 OR6A2O95222 327 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 CLPTM1O96005 669 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 F13BP05160 661 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 MMP7P09237 267 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 FAM157BP0CG42 384 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 OR8G3PP0DMU2 310 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 FUT1P19526 365 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 RBMXP38159 391 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 MAGEB1P43366 347 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 OR1E2P47887 323 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 UGT2B15P54855 530 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 MYBPC1Q00872 1141 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 RPL18Q07020 188 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 HNRNPA0Q13151 305 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 PIN1Q13526 163 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 FHL1Q13642 323 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 CCNIQ14094 377 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 LAPTM4AQ15012 233 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 VMACQ2NL98 169 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 TRMT5Q32P41 509 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 ALKBH6Q3KRA9 238 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 TTC33Q6PID6 262 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 CCDC80Q76M96 950 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 PATL1Q86TB9 770 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 LINC01356Q8N9X3 169 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 OR4K5Q8NGD3 323 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 MOSPD2Q8NHP6 518 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 PFN4Q8NHR9 129 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 TSPEARQ8WU66 669 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 TMEM255BQ8WV15 326 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 DYDC1Q8WWB3 177 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 GTF3AQ92664 365 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF566Q969W8 418 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF583Q96ND8 569 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF347Q96SE7 839 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 SLC19A3Q9BZV2 496 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 MS4A5Q9H3V2 200 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 DENND2DQ9H6A0 471 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 EVA1AQ9H8M9 152 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 NPHS2Q9NP85 383 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 DYNLRB1Q9NP97 96 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 B3GAT2Q9NPZ5 323 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 INTS9Q9NV88 658 aaKnown RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 DUSP13Q9UII6 198 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 TMEFF2Q9UIK5 374 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF229Q9UJW7 825 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 FBXO9Q9UK97 447 aaPredicted RBP6.01□□□□□ -1.45
HDAC3-207ENST00000475549 SH3GLB1Q9Y371 365 aa6.01□□□□□ -1.45
HDAC3-207ENST00000475549 TENM1Q9UKZ4 2725 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 ANK2Q01484 3957 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 IGLV3-9A0A075B6K5 115 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 M0R233 179 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 TRMUO75648 421 aaKnown RBP6□□□□□ -1.45
HDAC3-207ENST00000475549 RAB36O95755 333 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 BCL10O95999 233 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 AVPP01185 164 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 MT-ND1P03886 318 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF250P15622 560 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 APEX1P27695 318 aaKnown RBP6□□□□□ -1.45
HDAC3-207ENST00000475549 CDAP32320 146 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 AQP2P41181 271 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF133P52736 654 aaPredicted RBP6□□□□□ -1.45
HDAC3-207ENST00000475549 TMEM33P57088 247 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 LMO4P61968 165 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 SF3A3Q12874 501 aaKnown RBP eCLIP6□□□□□ -1.45
HDAC3-207ENST00000475549 ARMC4Q5T2S8 1044 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 GKAP1Q5VSY0 366 aaPredicted RBP6□□□□□ -1.45
HDAC3-207ENST00000475549 METTL21CQ5VZV1 264 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 CGB2Q6NT52 195 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 THSD4Q6ZMP0 1018 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 C1orf229Q6ZS94 237 aaPredicted RBP6□□□□□ -1.45
HDAC3-207ENST00000475549 LRRC18Q8N456 261 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 CLDN22Q8N7P3 220 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 SYT14Q8NB59 555 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 SLC30A7Q8NEW0 376 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 CLDND2Q8NHS1 167 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 LIPHQ8WWY8 451 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 RDH5Q92781 318 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 NABP1Q96AH0 204 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 LRRC58Q96CX6 371 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms