RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 SKA3Q8IX90 412 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 SLC22A24Q8N4F4 322 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 SCAIQ8N9R8 606 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 OR1J1Q8NGS3 322 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 TAF15Q92804 592 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMURF1-203ENST00000472627 SLC35B4Q969S0 331 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 CCDC115Q96NT0 180 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 SPATA9Q9BWV2 254 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 TCF7L2Q9NQB0 619 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 SELENONQ9NZV5 590 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 BTNL2Q9UIR0 455 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 ZDHHC8Q9ULC8 765 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 IFT52Q9Y366 437 aa11.78□□□□□ -0.52
SMURF1-203ENST00000472627 A0A087WUJ7 227 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 A8MXK9 166 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 E9PBE3 544 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 TRAPPC2LH3BP13 241 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 TGDSO95455 350 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 IGHV1-46P01743 117 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 MYZAPP0CAP1 466 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 PRG2P13727 222 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 APLNRP35414 380 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 SLC6A9P48067 706 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 PUDPQ08623 228 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 WHAMMP3Q1A5X7 153 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 C2orf68Q2NKX9 166 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 FIP1L1Q6UN15 594 aaKnown RBP11.77□□□□□ -0.53
SMURF1-203ENST00000472627 C6orf89Q6UWU4 347 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 ZNF621Q6ZSS3 439 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 RHOUQ7L0Q8 258 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 SERPINA11Q86U17 422 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 C1orf174Q8IYL3 243 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 MNS1Q8NEH6 495 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 TAAR8Q969N4 342 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 THOC1Q96FV9 657 aaKnown RBP11.77□□□□□ -0.53
SMURF1-203ENST00000472627 PATZ1Q9HBE1 687 aaKnown RBP11.77□□□□□ -0.53
SMURF1-203ENST00000472627 NOX4Q9NPH5 578 aa11.77□□□□□ -0.53
SMURF1-203ENST00000472627 EIF3KQ9UBQ5 218 aaKnown RBP11.77□□□□□ -0.53
SMURF1-203ENST00000472627 TRAV40A0A0B4J280 105 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 TM9SF1O15321 606 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 MFN2O95140 757 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 IGHV2-70P01814 119 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 PATE4P0C8F1 98 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 CCL2P13500 99 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 CBLP22681 906 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 TNFSF4P23510 183 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 AHCYP23526 432 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 CPT2P23786 658 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 ALDH3A1P30838 453 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 BPIFB3P59826 476 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 ERVS71-1P61550 626 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 SPANXN4Q5MJ08 99 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 SLC16A14Q7RTX9 510 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 PXKQ7Z7A4 578 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 C4orf33Q8N1A6 199 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 MUC20Q8N307 709 aaPredicted RBP11.76□□□□□ -0.53
SMURF1-203ENST00000472627 PAQR4Q8N4S7 273 aaPredicted RBP11.76□□□□□ -0.53
SMURF1-203ENST00000472627 TMEM86BQ8N661 226 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 OR6S1Q8NH40 331 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
SMURF1-203ENST00000472627 DCLRE1CQ96SD1 692 aaKnown RBP11.76□□□□□ -0.53
SMURF1-203ENST00000472627 TCF7L1Q9HCS4 588 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 A4GALTQ9NPC4 353 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 THUMPD1Q9NXG2 353 aaKnown RBP11.76□□□□□ -0.53
SMURF1-203ENST00000472627 KIF17Q9P2E2 1029 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 EGFL7Q9UHF1 273 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 PYCARDQ9ULZ3 195 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 LRCH1Q9Y2L9 728 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 RNF114Q9Y508 228 aa11.76□□□□□ -0.53
SMURF1-203ENST00000472627 IGHV3OR16-10A0A075B7F0 116 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 SERPINI2O75830 405 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 OR6A2O95222 327 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 PLATP00750 562 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 BCHEP06276 602 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 ADH4P08319 380 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 SELEP16581 610 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 TNFRSF1AP19438 455 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 NCALDP61601 193 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 BTG1P62324 171 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 HSF2Q03933 536 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 PAX8Q06710 450 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 ALG10BQ5I7T1 473 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 IFT20Q8IY31 132 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 CLIP4Q8N3C7 705 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 C10orf53Q8N6V4 93 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 RBM15BQ8NDT2 890 aaKnown RBP11.75□□□□□ -0.53
SMURF1-203ENST00000472627 GTF3AQ92664 365 aaKnown RBP11.75□□□□□ -0.53
SMURF1-203ENST00000472627 UPRTQ96BW1 309 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 FAM71F1Q96KD3 344 aaPredicted RBP11.75□□□□□ -0.53
SMURF1-203ENST00000472627 KCNN2Q9H2S1 579 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 NPHS2Q9NP85 383 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 TNFRSF19Q9NS68 423 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 TMEM38BQ9NVV0 291 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 GLTPQ9NZD2 209 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 C1RLQ9NZP8 487 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 KLHL14Q9P2G3 628 aa11.75□□□□□ -0.53
SMURF1-203ENST00000472627 ASH2LQ9UBL3 628 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms