RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SPATA21Q7Z572 469 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 HMGN2P46Q86SG4 172 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 FUNDC1Q8IVP5 155 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 METTL4Q8N3J2 472 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 ARFGAP2Q8N6H7 521 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 ACOT4Q8N9L9 421 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 FNDC5Q8NAU1 212 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 C9orf43Q8TAL5 461 aaPredicted RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 FBXO30Q8TB52 745 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 C16orf78Q8WTQ4 265 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 CT55Q8WUE5 264 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 MR1Q95460 341 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 RERGQ96A58 199 aaPredicted RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 VPS33AQ96AX1 596 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 EXOSC8Q96B26 276 aaKnown RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SPSB1Q96BD6 273 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 PPWD1Q96BP3 646 aaKnown RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 TM4SF18Q96CE8 201 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 CCDC126Q96EE4 140 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 C11orf24Q96F05 449 aaPredicted RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 GBP5Q96PP8 586 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 GAL3ST4Q96RP7 486 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 OVOL2Q9BRP0 275 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SLC39A3Q9BRY0 314 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 EFCAB11Q9BUY7 163 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 ULBP3Q9BZM4 244 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 RAB33BQ9H082 229 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 PCBD2Q9H0N5 130 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF385DQ9H6B1 395 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 LIN28AQ9H9Z2 209 aaKnown RBP3.34□□□□□ -1.87
COL9A1-206ENST00000470652 IL1RL2Q9HB29 575 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SLC7A10Q9NS82 523 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 RARRES3Q9UL19 164 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 TMCO1Q9UM00 188 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 SNX6Q9UNH7 406 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 WIPI2Q9Y4P8 454 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 NEUROG3Q9Y4Z2 214 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 ASB4Q9Y574 426 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 PCDHGA1Q9Y5H4 931 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 KLK4Q9Y5K2 254 aa3.34□□□□□ -1.87
COL9A1-206ENST00000470652 MAP1BP46821 2468 aaKnown RBP3.34□□□□□ -1.88
COL9A1-206ENST00000470652 DSPP15924 2871 aaKnown RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 CACNA1AO00555 2505 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 NINQ8N4C6 2090 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 GNG14A0A1W2PPG7 69 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ANKRD65E5RJM6 399 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 SLC28A1O00337 649 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 FBP2O00757 339 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF354AO60765 605 aaPredicted RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 F10P00742 488 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 KRT6AP02538 564 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 CLPSP04118 112 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 KRT6BP04259 564 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 SERPINA6P08185 405 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ANXA4P09525 319 aaPredicted RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 FREM3P0C091 2139 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 FAM58BPP0C7Q3 252 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 SLC35G6P0C7Q6 338 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 LBPP18428 481 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 NCF2P19878 526 aaPredicted RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 GPX3P22352 226 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 HIST1H1TP22492 207 aaPredicted RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 GATA2P23769 480 aaPredicted RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 CPT2P23786 658 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 PIK3R1P27986 724 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 OTX2P32243 289 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 FEN1P39748 380 aaKnown RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 XCR1P46094 333 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 KRT6CP48668 564 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ERFP50548 548 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 RAP1GDS1P52306 607 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 RGS1Q08116 209 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 C2orf80Q0P641 193 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ILKQ13418 452 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 CAPRIN1Q14444 709 aaKnown RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 EXOSC7Q15024 291 aaKnown RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 NNATQ16517 81 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ADPRMQ3LIE5 342 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 NKAIN1Q4KMZ8 207 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ATP6AP1LQ52LC2 224 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 AGKQ53H12 422 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 PAGE3Q5JUK9 113 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 SPANXN4Q5MJ08 99 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 OR4F3Q6IEY1 312 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 TMEM64Q6YI46 380 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 PIGWQ7Z7B1 504 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 ZER1Q7Z7L7 766 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 GALNT10Q86SR1 603 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 SNX32Q86XE0 403 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 MSRB3Q8IXL7 192 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 KIF2BQ8N4N8 673 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 CAMKVQ8NCB2 501 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 OR2L5Q8NG80 312 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 OR6C4Q8NGE1 309 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 OR9A2Q8NGT5 310 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 OR51Q1Q8NH59 317 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 OR5AK3PQ8NH89 298 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 PNPT1Q8TCS8 783 aaKnown RBP3.33□□□□□ -1.88
COL9A1-206ENST00000470652 RASL10AQ92737 203 aa3.33□□□□□ -1.88
COL9A1-206ENST00000470652 N4BP2L2Q92802 583 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms