RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 MPP4Q96JB8 637 aa21.02■□□□□ 0.96
PTCH1-210ENST00000468211 C19orf24Q9BVV8 132 aa21.02■□□□□ 0.96
PTCH1-210ENST00000468211 NANOGQ9H9S0 305 aa21.02■□□□□ 0.96
PTCH1-210ENST00000468211 A0A0G2JND7 137 aa21.01■□□□□ 0.95
PTCH1-210ENST00000468211 DHHO43323 396 aa21.01■□□□□ 0.95
PTCH1-210ENST00000468211 CCL2P13500 99 aa21.01■□□□□ 0.95
PTCH1-210ENST00000468211 CDH15P55291 814 aa21.01■□□□□ 0.95
PTCH1-210ENST00000468211 GALK2Q01415 458 aa21.01■□□□□ 0.95
PTCH1-210ENST00000468211 CCDC80Q76M96 950 aa21.01■□□□□ 0.95
PTCH1-210ENST00000468211 LINC01356Q8N9X3 169 aa21.01■□□□□ 0.95
PTCH1-210ENST00000468211 C1orf159Q96HA4 380 aa21.01■□□□□ 0.95
PTCH1-210ENST00000468211 QDPRP09417 244 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 OR8G3PP0DMU2 310 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 UMPSP11172 480 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 MYBPC1Q00872 1141 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 CALHM3Q86XJ0 350 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 NKAIN4Q8IVV8 208 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 OR4K5Q8NGD3 323 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 PFN4Q8NHR9 129 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 ZNF347Q96SE7 839 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 SLC19A3Q9BZV2 496 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 MS4A5Q9H3V2 200 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 DUSP13Q9UII6 198 aa21■□□□□ 0.95
PTCH1-210ENST00000468211 ANK2Q01484 3957 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 BLOC1S5-TXNDC5H3BN57 136 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 FXYD1O00168 92 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 WNT9BO14905 357 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 SHOX2O60902 331 aaPredicted RBP20.99■□□□□ 0.95
PTCH1-210ENST00000468211 NCR1O76036 304 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 BCL10O95999 233 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 HIST1H2ABP04908 130 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 F13BP05160 661 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 FAM157BP0CG42 384 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 NAT2P11245 290 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 UGT2B15P54855 530 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 HIST3H3Q16695 136 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 INTS11Q5TA45 600 aaKnown RBP20.99■□□□□ 0.95
PTCH1-210ENST00000468211 HIST3H2AQ7L7L0 130 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 NANOGNBQ7Z5D8 188 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 HIST1H2ACQ93077 130 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 YIPF5Q969M3 257 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 MCHR2Q969V1 340 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 SLC7A8Q9UHI5 535 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 FBXL3Q9UKT7 428 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 SH3GLB1Q9Y371 365 aa20.99■□□□□ 0.95
PTCH1-210ENST00000468211 CLPTM1O96005 669 aa20.98■□□□□ 0.95
PTCH1-210ENST00000468211 RPS23P62266 143 aaKnown RBP20.98■□□□□ 0.95
PTCH1-210ENST00000468211 RPL18Q07020 188 aaKnown RBP20.98■□□□□ 0.95
PTCH1-210ENST00000468211 ALKBH6Q3KRA9 238 aa20.98■□□□□ 0.95
PTCH1-210ENST00000468211 SYT14Q8NB59 555 aa20.98■□□□□ 0.95
PTCH1-210ENST00000468211 SLC30A7Q8NEW0 376 aa20.98■□□□□ 0.95
PTCH1-210ENST00000468211 TMEM255BQ8WV15 326 aa20.98■□□□□ 0.95
PTCH1-210ENST00000468211 MRPL13Q9BYD1 178 aaKnown RBP20.98■□□□□ 0.95
PTCH1-210ENST00000468211 OR51B6Q9H340 312 aa20.98■□□□□ 0.95
PTCH1-210ENST00000468211 NARFLQ9H6Q4 476 aa20.98■□□□□ 0.95
PTCH1-210ENST00000468211 C20orf141Q9NUB4 165 aa20.98■□□□□ 0.95
PTCH1-210ENST00000468211 TMEFF2Q9UIK5 374 aaPredicted RBP20.98■□□□□ 0.95
PTCH1-210ENST00000468211 IGHG1P01857 330 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 MT-ND1P03886 318 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 ERVS71-1P61550 626 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 METTL21CQ5VZV1 264 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 HDXQ7Z353 690 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 ASB10Q8WXI3 467 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 RDH5Q92781 318 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 TSPAN32Q96QS1 320 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 SEPHS2Q99611 448 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 TMEM120AQ9BXJ8 343 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 RACGAP1Q9H0H5 632 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 RNF121Q9H920 327 aa20.97■□□□□ 0.95
PTCH1-210ENST00000468211 OR7A10O76100 309 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 FUT1P19526 365 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 LSP1P33241 339 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 AQP2P41181 271 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 MAGEB1P43366 347 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 CLRN1P58418 232 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 PIN1Q13526 163 aaPredicted RBP20.96■□□□□ 0.95
PTCH1-210ENST00000468211 CYLC2Q14093 348 aaPredicted RBP20.96■□□□□ 0.95
PTCH1-210ENST00000468211 DEF8Q6ZN54 512 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 NOXO1Q8NFA2 376 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 MOSPD2Q8NHP6 518 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 CLDND2Q8NHS1 167 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 RASSF5Q8WWW0 418 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 LRRC58Q96CX6 371 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 SIKE1Q9BRV8 207 aa20.96■□□□□ 0.95
PTCH1-210ENST00000468211 ZNF275Q9NSD4 429 aaPredicted RBP20.96■□□□□ 0.95
PTCH1-210ENST00000468211 A0A1W2PPW3 197 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 FAM157AC9JC47 383 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 TRMUO75648 421 aaKnown RBP20.95■□□□□ 0.94
PTCH1-210ENST00000468211 FARS2O95363 451 aaKnown RBP20.95■□□□□ 0.94
PTCH1-210ENST00000468211 ACHEP22303 614 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 GPR6P46095 362 aaPredicted RBP20.95■□□□□ 0.94
PTCH1-210ENST00000468211 OR1E2P47887 323 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 SF3A3Q12874 501 aaKnown RBP eCLIP20.95■□□□□ 0.94
PTCH1-210ENST00000468211 RGS7BPQ6MZT1 257 aaPredicted RBP20.95■□□□□ 0.94
PTCH1-210ENST00000468211 TMEM53Q6P2H8 277 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 SLC16A14Q7RTX9 510 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 LRRC18Q8N456 261 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 ZNF583Q96ND8 569 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 VIPAS39Q9H9C1 493 aa20.95■□□□□ 0.94
PTCH1-210ENST00000468211 CDH20Q9HBT6 801 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms