RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SYNPRQ8TBG9 265 aa10.59□□□□□ -0.71
AC004540.1-204ENST00000449537 TSPAN32Q96QS1 320 aa10.59□□□□□ -0.71
AC004540.1-204ENST00000449537 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
AC004540.1-204ENST00000449537 OR5V1Q9UGF6 321 aa10.59□□□□□ -0.71
AC004540.1-204ENST00000449537 EGFL7Q9UHF1 273 aa10.59□□□□□ -0.71
AC004540.1-204ENST00000449537 KCNE5Q9UJ90 142 aa10.59□□□□□ -0.71
AC004540.1-204ENST00000449537 CAPN7Q9Y6W3 813 aa10.59□□□□□ -0.71
AC004540.1-204ENST00000449537 ZC3H12DA2A288 527 aaKnown RBP10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 LIPT2A6NK58 231 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 H0YL77 283 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 CFLARO15519 480 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 AKAP10O43572 662 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 SLC22A3O75751 556 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 MT-ND5P03915 603 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 MELTFP08582 738 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 NCF2P19878 526 aaPredicted RBP10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 MAKP20794 623 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 EFNA1P20827 205 aaPredicted RBP10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 PRDX6P30041 224 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 PGM1P36871 562 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 IDH2P48735 452 aaKnown RBP10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 POLR2HP52434 150 aaKnown RBP10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 BPIFB3P59826 476 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 MOGQ16653 247 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 LRRN1Q6UXK5 716 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 EPHX4Q8IUS5 362 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 GPR137CQ8N3F9 429 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 KLHL36Q8N4N3 616 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 ZSCAN4Q8NAM6 433 aaPredicted RBP10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 TBC1D15Q8TC07 691 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 ZNF837Q96EG3 531 aaPredicted RBP10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 ZNF75AQ96N20 296 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 OCSTAMPQ9BR26 566 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 RMND5AQ9H871 391 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 PATZ1Q9HBE1 687 aaKnown RBP10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 SAR1AQ9NR31 198 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 GIMAP2Q9UG22 337 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 IL20RAQ9UHF4 553 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 SLC7A8Q9UHI5 535 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 OSGIN1Q9UJX0 560 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
AC004540.1-204ENST00000449537 IGLV3-9A0A075B6K5 115 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 ZNF99A8MXY4 864 aaPredicted RBP10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 RNASET2O00584 256 aaKnown RBP10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 GPR137BO60478 399 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 FCMRO60667 390 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 SCN2BO60939 215 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 UGT2B17O75795 530 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 ZNF250P15622 560 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 PTDSS1P48651 473 aaKnown RBP10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 CCT3P49368 545 aaKnown RBP10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 SEC61A1P61619 476 aaKnown RBP10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 TP53BP2Q13625 1128 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 C6orf89Q6UWU4 347 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 BTNL3Q6UXE8 466 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 C1orf174Q8IYL3 243 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 SPICQ8N5J4 248 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 SSMEM1Q8WWF3 244 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 C11orf40Q8WZ69 217 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 MOAP1Q96BY2 351 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 COQ8BQ96D53 544 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 MYLK2Q9H1R3 596 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 C16orf95Q9H693 158 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 MKLN1Q9UL63 735 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 SLC35A3Q9Y2D2 325 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 NPTNQ9Y639 398 aa10.57□□□□□ -0.72
AC004540.1-204ENST00000449537 CENPVL1A0A0U1RR11 272 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 A8MXK9 166 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 C3orf84H3BNL1 204 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 BCAS1O75363 584 aaPredicted RBP10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 SLC43A1O75387 559 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 STX11O75558 287 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 UBOX5O94941 541 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 NPPAP01160 153 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 CHRM4P08173 479 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 TACR3P29371 465 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 S100A3P33764 101 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 POLR2JP52435 117 aaKnown RBP10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 CLDN17P56750 224 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 TXNL4AP83876 142 aaKnown RBP10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 CD69Q07108 199 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 LARS2Q15031 903 aaKnown RBP10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 ESCO2Q56NI9 601 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 FAM209AQ5JX71 171 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 BLOC1S3Q6QNY0 202 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 Q6ZSV7 163 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 Q6ZTK2 550 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 CPEB3Q8NE35 698 aaKnown RBP10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 FAM71CQ8NEG0 241 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 OR56A1Q8NGH5 318 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 PHF21AQ96BD5 680 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 CMTM5Q96DZ9 223 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 NEURL3Q96EH8 262 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 OR7D2Q96RA2 312 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 DCLRE1CQ96SD1 692 aaKnown RBP10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 DUSP26Q9BV47 211 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 TAPBPLQ9BX59 468 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 DENND2DQ9H6A0 471 aaPredicted RBP10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 GPATCH2Q9NW75 528 aa10.56□□□□□ -0.72
AC004540.1-204ENST00000449537 ADPRHL2Q9NX46 363 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms