RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 LRRC6Q86X45 466 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 DAW1Q8N136 415 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 TBC1D19Q8N5T2 526 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 Q8N9P0 234 aaPredicted RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 TMEM178AQ8NBL3 297 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ICA1LQ8NDH6 482 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 OR9Q2Q8NGE9 314 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 LRRC20Q8TCA0 184 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 BLOC1S5Q8TDH9 187 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 SMAP2Q8WU79 429 aaPredicted RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 MARC2Q969Z3 335 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 MRPL24Q96A35 216 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 MCUR1Q96AQ8 359 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 C19orf60Q96EN9 201 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 MAGED4Q96JG8 741 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 CAPZA3Q96KX2 299 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 UHRF2Q96PU4 802 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 CPXM1Q96SM3 734 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 OVOL2Q9BRP0 275 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ALG12Q9BV10 488 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PPA2Q9H2U2 334 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 NARFLQ9H6Q4 476 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 CRLF2Q9HC73 371 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 ZC4H2Q9NQZ6 224 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 DYRK4Q9NR20 520 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 B3GNT2Q9NY97 397 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 EIF3KQ9UBQ5 218 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 GLS2Q9UI32 602 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 IKZF3Q9UKT9 509 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 TCF19Q9Y242 345 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 RBMX2Q9Y388 322 aaKnown RBP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3-203ENST00000430118 SLCO1B1Q9Y6L6 691 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 PCSK5Q92824 1860 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 AHCTF1Q8WYP5 2266 aa3.45□□□□□ -1.86
HMGB3-203ENST00000430118 DNHD1Q96M86 4753 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ANAPC1Q9H1A4 1944 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PLXNA2O75051 1894 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 A0A1W2PQ72 361 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 FAM92AA1XBS5 289 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 GSAPA4D1B5 854 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 OR6C74A6NCV1 312 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ZSCAN5CA6NGD5 496 aaPredicted RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ACOD1A6NK06 481 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 C2orf74A8MZ97 194 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 TCP11X1B4DZS4 312 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 CLDN25C9JDP6 229 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 D6RAR5 112 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 K7EQM0 130 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 LATO43561 262 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 NUDT21O43809 227 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 UGT1A9O60656 530 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 RBBP9O75884 186 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 TGM6O95932 706 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 IL1BP01584 269 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 CALB1P05937 261 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 S100A9P06702 114 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 FHP07954 510 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 HMBSP08397 361 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ZDHHC11BP0C7U3 371 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 DBTP11182 482 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 POU2F1P14859 743 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 RAB4AP20338 218 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 UGT1A4P22310 534 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 DCKP27707 260 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 HNRNPH3P31942 346 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 UGT1A3P35503 534 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 UGT1A5P35504 534 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 TIMP3P35625 211 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 SPAM1P38567 509 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PSMD8P48556 350 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PGFP49763 221 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 DLX5P56178 289 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 RPL27P61353 136 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ESRRGP62508 458 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 RPS4XP62701 263 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 RBBP4Q09028 425 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 NFATC2Q13469 925 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 LTB4RQ15722 352 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 AANATQ16613 207 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 CDKN3Q16667 212 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF699Q32M78 642 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 HNRNPA1L2Q32P51 320 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 YIF1BQ5BJH7 314 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 HES5Q5TA89 166 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PDPK2PQ6A1A2 396 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 CGB2Q6NT52 195 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 CCDC137Q6PK04 289 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 C3P1Q6ZMU1 363 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 GPRIN3Q6ZVF9 776 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 STXBP4Q6ZWJ1 553 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 SLC26A9Q7LBE3 791 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 LRRC70Q7Z2Q7 622 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 P4HA3Q7Z4N8 544 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PTAR1Q7Z6K3 402 aaPredicted RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 LHFPL4Q7Z7J7 247 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 LHFPL3Q86UP9 236 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 HORMAD1Q86X24 394 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 HOGA1Q86XE5 327 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 MICU2Q8IYU8 434 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms