RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ZNF566Q969W8 418 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 SLC25A44Q96H78 314 aaPredicted RBP13.31□□□□□ -0.28
SEC13-210ENST00000428626 TSPAN32Q96QS1 320 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 ZNF347Q96SE7 839 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 DENND2DQ9H6A0 471 aaPredicted RBP13.31□□□□□ -0.28
SEC13-210ENST00000428626 ZNF229Q9UJW7 825 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 SHOX2O60902 331 aaPredicted RBP13.3□□□□□ -0.28
SEC13-210ENST00000428626 OR6A2O95222 327 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 F13BP05160 661 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 ERCC1P07992 297 aaPredicted RBP13.3□□□□□ -0.28
SEC13-210ENST00000428626 QDPRP09417 244 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 NAT2P11245 290 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 FUT4P22083 530 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 UGT2B15P54855 530 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 MYBPC1Q00872 1141 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 HIST3H3Q16695 136 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 ALKBH6Q3KRA9 238 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 GKAP1Q5VSY0 366 aaPredicted RBP13.3□□□□□ -0.28
SEC13-210ENST00000428626 NANOGP8Q6NSW7 305 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 CCDC80Q76M96 950 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 CALHM3Q86XJ0 350 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 LINC01356Q8N9X3 169 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 OR4K5Q8NGD3 323 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 CLDND2Q8NHS1 167 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 TSPEARQ8WU66 669 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 MPP4Q96JB8 637 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 MRPL13Q9BYD1 178 aaKnown RBP13.3□□□□□ -0.28
SEC13-210ENST00000428626 RACGAP1Q9H0H5 632 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 NARFLQ9H6Q4 476 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 NANOGQ9H9S0 305 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 C20orf141Q9NUB4 165 aa13.3□□□□□ -0.28
SEC13-210ENST00000428626 TMEFF2Q9UIK5 374 aaPredicted RBP13.3□□□□□ -0.28
SEC13-210ENST00000428626 A0A0G2JND7 137 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 FAM157AC9JC47 383 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 RP2O75695 350 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 OR8G3PP0DMU2 310 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 HNF1AP20823 631 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 GALK2Q01415 458 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 RPL18Q07020 188 aaKnown RBP13.29□□□□□ -0.28
SEC13-210ENST00000428626 SNX32Q86XE0 403 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 TMEM255BQ8WV15 326 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 GTF3AQ92664 365 aaKnown RBP13.29□□□□□ -0.28
SEC13-210ENST00000428626 MCHR2Q969V1 340 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 SEPHS2Q99611 448 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 SLC19A3Q9BZV2 496 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 OR51B6Q9H340 312 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 MS4A5Q9H3V2 200 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 ZNF275Q9NSD4 429 aaPredicted RBP13.29□□□□□ -0.28
SEC13-210ENST00000428626 SLC7A8Q9UHI5 535 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 DUSP13Q9UII6 198 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 SPEF1Q9Y4P9 236 aa13.29□□□□□ -0.28
SEC13-210ENST00000428626 IGKV1D-43A0A0B4J1Z2 117 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 HMGB1P1B2RPK0 211 aaPredicted RBP13.28□□□□□ -0.28
SEC13-210ENST00000428626 BLOC1S5-TXNDC5H3BN57 136 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 BCL10O95999 233 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 MMP7P09237 267 aaPredicted RBP13.28□□□□□ -0.28
SEC13-210ENST00000428626 UMPSP11172 480 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 FUT1P19526 365 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 AQP2P41181 271 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 MAGEB1P43366 347 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 PIN1Q13526 163 aaPredicted RBP13.28□□□□□ -0.28
SEC13-210ENST00000428626 TMEM255AQ5JRV8 349 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 NANOGNBQ7Z5D8 188 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 SLC30A8Q8IWU4 369 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 SYT14Q8NB59 555 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 SLC30A7Q8NEW0 376 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 NOXO1Q8NFA2 376 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 MOSPD2Q8NHP6 518 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 ASB10Q8WXI3 467 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 RDH5Q92781 318 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 NMD3Q96D46 503 aaKnown RBP13.28□□□□□ -0.28
SEC13-210ENST00000428626 TRIM33Q9UPN9 1127 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 SH3GLB1Q9Y371 365 aa13.28□□□□□ -0.28
SEC13-210ENST00000428626 IGLV3-9A0A075B6K5 115 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 TRMUO75648 421 aaKnown RBP13.27□□□□□ -0.29
SEC13-210ENST00000428626 OR7A10O76100 309 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 IGHG1P01857 330 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 MT-ND1P03886 318 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 ACHEP22303 614 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 GPR6P46095 362 aaPredicted RBP13.27□□□□□ -0.29
SEC13-210ENST00000428626 OR1E2P47887 323 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 DVL1P1P54792 670 aaPredicted RBP13.27□□□□□ -0.29
SEC13-210ENST00000428626 RPS23P62266 143 aaKnown RBP13.27□□□□□ -0.29
SEC13-210ENST00000428626 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.29
SEC13-210ENST00000428626 INTS11Q5TA45 600 aaKnown RBP13.27□□□□□ -0.29
SEC13-210ENST00000428626 RINLQ6ZS11 566 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 SLC26A7Q8TE54 656 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 ZNF583Q96ND8 569 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 TMEM120AQ9BXJ8 343 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 TREM2Q9NZC2 230 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 TAAR3PQ9P1P4 343 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 FBXL3Q9UKT7 428 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 UGT2A1Q9Y4X1 527 aa13.27□□□□□ -0.29
SEC13-210ENST00000428626 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 A0A1W2PPW3 197 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 PIP5K1CO60331 668 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 SASH3O75995 380 aa13.26□□□□□ -0.29
SEC13-210ENST00000428626 SLC2A10O95528 541 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms