RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ITGA5P08648 1049 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 PEBP1P30086 187 aaKnown RBP15.14■□□□□ 0.01
PKP4-204ENST00000421462 FHL1Q13642 323 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 FAM53BQ14153 422 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 ERN2Q76MJ5 926 aaKnown RBP15.14■□□□□ 0.01
PKP4-204ENST00000421462 ZSCAN1Q8NBB4 408 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 INO80EQ8NBZ0 244 aaPredicted RBP15.14■□□□□ 0.01
PKP4-204ENST00000421462 HRH4Q9H3N8 390 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 MRM2Q9UI43 246 aaKnown RBP15.14■□□□□ 0.01
PKP4-204ENST00000421462 TRBV23-1A0A0A0MS06 115 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 DCTN6O00399 190 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 BCL2L11O43521 198 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 CT62P0C5K7 136 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 P2RY2P41231 377 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 CDKN2AP42771 156 aaKnown RBP15.13■□□□□ 0.01
PKP4-204ENST00000421462 DEFB103AP81534 67 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 ZNF528Q3MIS6 628 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 C11orf87Q6NUJ2 197 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 CCDC107Q8WV48 283 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 GAREM1Q9H706 876 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 DHCR7Q9UBM7 475 aaKnown RBP15.13■□□□□ 0.01
PKP4-204ENST00000421462 CPED1A4D0V7 1026 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 C5orf51A6NDU8 294 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 PRKXP51817 358 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 ARFIP1P53367 373 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 DPTQ07507 201 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 POMZP3Q6PJE2 187 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 SLC35D2Q76EJ3 337 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 KCNRGQ8N5I3 272 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 OR1M1Q8NGA1 313 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 OR10G6Q8NH81 332 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
PKP4-204ENST00000421462 ZBTB8AQ96BR9 441 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 MRPL48Q96GC5 212 aaKnown RBP15.13■□□□□ 0.01
PKP4-204ENST00000421462 TAS2R8Q9NYW2 309 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 MBD2Q9UBB5 411 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 LAMP5Q9UJQ1 280 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 ICAM5Q9UMF0 924 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 INSL6Q9Y581 213 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 DCDC2BA2VCK2 349 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 FGF17O60258 216 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 SNAPC5O75971 98 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 HLA-DQA2P01906 255 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 CMPK1P30085 196 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 TLX1P31314 330 aaPredicted RBP15.13■□□□□ 0.01
PKP4-204ENST00000421462 RFC3P40938 356 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 POLR2GP62487 172 aaKnown RBP eCLIP15.13■□□□□ 0.01
PKP4-204ENST00000421462 VN1R4Q7Z5H5 301 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 JAZF1Q86VZ6 243 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 BPIFB2Q8N4F0 458 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 LRRC3BQ96PB8 259 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 SELENOIQ9C0D9 397 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 MKKSQ9NPJ1 570 aaPredicted RBP15.13■□□□□ 0.01
PKP4-204ENST00000421462 NIT2Q9NQR4 276 aa15.13■□□□□ 0.01
PKP4-204ENST00000421462 CGGBP1Q9UFW8 167 aaPredicted RBP15.13■□□□□ 0.01
PKP4-204ENST00000421462 RNF222A6NCQ9 220 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 AKR1C4P17516 323 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 ETV3LQ6ZN32 361 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 TMEM52Q8NDY8 209 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 CCDC74AQ96AQ1 378 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 DPP7Q9UHL4 492 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 PMS2P2O95744 297 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 PGAM2P15259 253 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 VIPR2P41587 438 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 MECP2P51608 486 aaKnown RBP15.12■□□□□ 0.01
PKP4-204ENST00000421462 EIF2B1Q14232 305 aaKnown RBP15.12■□□□□ 0.01
PKP4-204ENST00000421462 AVPI1Q5T686 147 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 ENPP7Q6UWV6 458 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 ANKRD33Q7Z3H0 272 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 FAM3DQ96BQ1 224 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 FAM117AQ9C073 453 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 PITHD1Q9GZP4 211 aaPredicted RBP15.12■□□□□ 0.01
PKP4-204ENST00000421462 WDR76Q9H967 626 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 STARD5Q9NSY2 213 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 TNFSF18Q9UNG2 199 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 MRPS2Q9Y399 296 aaKnown RBP15.12■□□□□ 0.01
PKP4-204ENST00000421462 ENTPD2Q9Y5L3 495 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 ETV7Q9Y603 341 aa15.12■□□□□ 0.01
PKP4-204ENST00000421462 P2RX6O15547 441 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 RHOP08100 348 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 ACAA1P09110 424 aaPredicted RBP15.11■□□□□ 0.01
PKP4-204ENST00000421462 TACSTD2P09758 323 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 CASRP41180 1078 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 PTGFRP43088 359 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 ATPAF1Q5TC12 328 aaPredicted RBP15.11■□□□□ 0.01
PKP4-204ENST00000421462 ANKRD16Q6P6B7 361 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 GLYATL2Q8WU03 294 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 LCN9Q8WX39 176 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 ELF4Q99607 663 aaPredicted RBP15.11■□□□□ 0.01
PKP4-204ENST00000421462 SERTAD3Q9UJW9 196 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 SLC22A13Q9Y226 551 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 WNT11O96014 354 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 FABP1P07148 127 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 SLC35G6P0C7Q6 338 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 ADH5P11766 374 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 MAPK3P27361 379 aaPredicted RBP15.11■□□□□ 0.01
PKP4-204ENST00000421462 TMEM200AQ86VY9 491 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 CLEC1AQ8NC01 280 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 COX14Q96I36 57 aa15.11■□□□□ 0.01
PKP4-204ENST00000421462 POTEKPQ9BYX7 375 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms