RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 STX18Q9P2W9 335 aaKnown RBP9.19□□□□□ -0.94
RFC1-203ENST00000418436 SLC7A8Q9UHI5 535 aa9.19□□□□□ -0.94
RFC1-203ENST00000418436 ST6GALNAC2Q9UJ37 374 aa9.19□□□□□ -0.94
RFC1-203ENST00000418436 POMPQ9Y244 141 aa9.19□□□□□ -0.94
RFC1-203ENST00000418436 SIGLEC7Q9Y286 467 aa9.19□□□□□ -0.94
RFC1-203ENST00000418436 LYVE1Q9Y5Y7 322 aa9.19□□□□□ -0.94
RFC1-203ENST00000418436 POLQO75417 2590 aa9.19□□□□□ -0.94
RFC1-203ENST00000418436 TCRBV3S1A0A5B6 114 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 TRMUO75648 421 aaKnown RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 WNT11O96014 354 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 PLAUP00749 431 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 IGHG1P01857 330 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 RAP2AP10114 183 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 HOXB6P17509 224 aaKnown RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 PTAFRP25105 342 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 FXYD6P3P58550 94 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 CTXN1P60606 82 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 RPL27P61353 136 aaKnown RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 BSPH1Q075Z2 132 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 FLOT2Q14254 428 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 C11orf91Q3C1V1 193 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 C1orf94Q6P1W5 598 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 PAMR1Q6UXH9 720 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 ZNF704Q6ZNC4 412 aaPredicted RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 C20orf204Q6ZNR8 217 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 HDDC2Q7Z4H3 204 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 CCDC36Q8IYA8 594 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 FAM169BQ8N8A8 192 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 LILRB1Q8NHL6 650 aaPredicted RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 ZNF519Q8TB69 540 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 HDAC2Q92769 488 aaKnown RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 NMD3Q96D46 503 aaKnown RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 ULBP2Q9BZM5 246 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 LRMDAQ9H2I8 198 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 MMADHCQ9H3L0 296 aaPredicted RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 KRCC1Q9NPI7 259 aaPredicted RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 CRNNQ9UBG3 495 aaPredicted RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 ZNF346Q9UL40 294 aaKnown RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 TMCC3Q9ULS5 477 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 EDARQ9UNE0 448 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 RNF115Q9Y4L5 304 aa9.18□□□□□ -0.94
RFC1-203ENST00000418436 MAGED1Q9Y5V3 778 aaPredicted RBP9.18□□□□□ -0.94
RFC1-203ENST00000418436 SPG11Q96JI7 2443 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 HEATR1Q9H583 2144 aaKnown RBP9.17□□□□□ -0.94
RFC1-203ENST00000418436 A0A096LPE4 126 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 LOC100996750A0A140TA64 210 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 A0A1W2PPZ6 126 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 DHRS12A0PJE2 317 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 UNC119BA6NIH7 251 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 MCIDASD6RGH6 385 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 TNFRSF11BO00300 401 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 DHHO43323 396 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 OR10H3O60404 316 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 NDUFB2O95178 105 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 ATE1O95260 518 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 CD3EP07766 207 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 CD14P08571 375 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 QDPRP09417 244 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 FPR3P25089 353 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 CD40P25942 277 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 HOXC12P31275 282 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 IFNGR2P38484 337 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 GSSP48637 474 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 ZNF83P51522 516 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 CLRN1P58418 232 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 UBE2NP61088 152 aaKnown RBP9.17□□□□□ -0.94
RFC1-203ENST00000418436 C3orf36Q3SXR2 165 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 C10orf128Q5T292 105 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 FAM205BPQ63HN1 556 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 OR2T5Q6IEZ7 315 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 ZNF770Q6IQ21 691 aaPredicted RBP9.17□□□□□ -0.94
RFC1-203ENST00000418436 KLHL17Q6TDP4 642 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 KLHL24Q6TFL4 600 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 TMEM108Q6UXF1 575 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 FAM122BQ7Z309 247 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 IGFN1Q86VF2 1251 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 LINC00471Q8N535 108 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 PAPD5Q8NDF8 572 aaKnown RBP9.17□□□□□ -0.94
RFC1-203ENST00000418436 NOXO1Q8NFA2 376 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 OR2T29Q8NH02 315 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 CANT1Q8WVQ1 401 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 MCHR2Q969V1 340 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 RSRC1Q96IZ7 334 aaKnown RBP9.17□□□□□ -0.94
RFC1-203ENST00000418436 RADILQ96JH8 1075 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 TSPAN32Q96QS1 320 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 GPX7Q96SL4 187 aaPredicted RBP9.17□□□□□ -0.94
RFC1-203ENST00000418436 FOXB1Q99853 325 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 CHID1Q9BWS9 393 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 KRTAP4-6Q9BYQ5 205 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 SMURF2Q9HAU4 748 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 MOV10Q9HCE1 1003 aaKnown RBP9.17□□□□□ -0.94
RFC1-203ENST00000418436 NRIP3Q9NQ35 241 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 VNN3Q9NY84 501 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 B3GNT2Q9NY97 397 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 MGAT4BQ9UQ53 548 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 AURKCQ9UQB9 309 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 POFUT2Q9Y2G5 429 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 CADP27708 2225 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 DSCAMO60469 2012 aa9.17□□□□□ -0.94
RFC1-203ENST00000418436 ZNF503-AS2A6NEH8 195 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms