RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 FAM120CQ9NX05 1096 aaKnown RBP3.64□□□□□ -1.83
CLK1-203ENST00000409769 MS4A12Q9NXJ0 267 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 TAS2R1Q9NYW7 299 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 SLC25A37Q9NYZ2 338 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 C5AR2Q9P296 337 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 ABCD2Q9UBJ2 740 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 DHCR7Q9UBM7 475 aaKnown RBP3.64□□□□□ -1.83
CLK1-203ENST00000409769 PHF11Q9UIL8 331 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 BTNL2Q9UIR0 455 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 LEF1Q9UJU2 399 aaPredicted RBP3.64□□□□□ -1.83
CLK1-203ENST00000409769 FBXW2Q9UKT8 454 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 RARRES3Q9UL19 164 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 WDR83OSQ9Y284 106 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 NDUFAF1Q9Y375 327 aa3.64□□□□□ -1.83
CLK1-203ENST00000409769 DOCK10Q96BY6 2186 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 FRYLO94915 3013 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 A0A096LPI6 279 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 IGKV3D-11A0A0A0MRZ8 115 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 SPAARA0A1B0GVQ0 90 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 A0A1W2PPK0 400 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 C15orf61A6NNL5 157 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 WASHC1A8K0Z3 465 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 EFCAB7A8K855 629 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 MRASO14807 208 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 AIM2O14862 343 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 ANGPT2O15123 496 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 POLR1CO15160 346 aaPredicted RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 PGRMC2O15173 223 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 PLOD3O60568 738 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 B4GALT2O60909 372 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 SCRG1O75711 98 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 NPPAP01160 153 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 HBQ1P09105 142 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 IFI6P09912 130 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 ZCCHC18P0CG32 403 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 RNH1P13489 461 aaKnown RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 ITIH1P19827 911 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 IL10P22301 178 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 ACHEP22303 614 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 CPN2P22792 545 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 MC5RP33032 325 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 ETV5P41161 510 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 OR1D4P47884 311 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 TRPC1P48995 793 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 NUDT2P50583 147 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 MNAT1P51948 309 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 LMO4P61968 165 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 SKP1P63208 163 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 HBA1P69905 142 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 LRRC74AQ0VAA2 488 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 EIF3IQ13347 325 aaKnown RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 TRMT5Q32P41 509 aaKnown RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 DNAL1Q4LDG9 190 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 CPTPQ5TA50 214 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 LCN1P1Q5VSP4 162 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 ANXA8L1Q5VT79 327 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 OR52E8Q6IFG1 317 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 SLC30A6Q6NXT4 461 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 RPUSD3Q6P087 351 aaKnown RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 CYB5D1Q6P9G0 228 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 IL17RELQ6ZVW7 336 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 CLECL1Q8IZS7 167 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 KIF2BQ8N4N8 673 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 OR8J3Q8NGG0 315 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 OR51Q1Q8NH59 317 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 CDC26Q8NHZ8 85 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 GATAD1Q8WUU5 269 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 N4BP2L2Q92802 583 aaPredicted RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 CIDECQ96AQ7 238 aaPredicted RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 EXOSC8Q96B26 276 aaKnown RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 LRRC58Q96CX6 371 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 CNRIP1Q96F85 164 aaPredicted RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 ITCHQ96J02 903 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 CCDC115Q96NT0 180 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 ZBTB18Q99592 522 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 CGREF1Q99674 301 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 HOPXQ9BPY8 73 aaPredicted RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 INPP5KQ9BT40 448 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 DDA1Q9BW61 102 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 SLC26A1Q9H2B4 701 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 GLIPR2Q9H4G4 154 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 IKZF5Q9H5V7 419 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 RPF2Q9H7B2 306 aaKnown RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 RMND5AQ9H871 391 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 COPS7BQ9H9Q2 264 aaPredicted RBP3.63□□□□□ -1.83
CLK1-203ENST00000409769 WDR41Q9HAD4 459 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 EFCAB1Q9HAE3 211 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 MIEF1Q9NQG6 463 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 NDE1Q9NXR1 346 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 VAPAQ9P0L0 249 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 SPACA6W5XKT8 324 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
CLK1-203ENST00000409769 SPTBN2O15020 2390 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 MED13Q9UHV7 2174 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 PIEZO1Q92508 2521 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 IGLV7-46A0A075B6I9 117 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 C15orf38-AP3S2A0A0A6YYH1 394 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 TRAV24A0A0B4J272 114 aa3.62□□□□□ -1.83
CLK1-203ENST00000409769 VSTM2BA6NLU5 285 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms