RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ZNF75AQ96N20 296 aa12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 SEPHS2Q99611 448 aa12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 VRK1Q99986 396 aaPredicted RBP12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 PIMREGQ9BSJ6 248 aa12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 MRPL13Q9BYD1 178 aaKnown RBP12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 SMURF2Q9HAU4 748 aa12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 INIPQ9NRY2 104 aa12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 TMEM160Q9NX00 188 aa12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 FN1P02751 2386 aaKnown RBP12.58□□□□□ -0.4
NIF3L1-205ENST00000409588 A0A096LNT2 108 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 A8MV72 311 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 KPNA4O00629 521 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 IFNA2P01563 188 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 IFNW1P05000 195 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 QDPRP09417 244 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 B4GALT1P15291 398 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 OR1E2P47887 323 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 PTDSS1P48651 473 aaKnown RBP12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 ZNF133P52736 654 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 UGT2B15P54855 530 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 CLRN1P58418 232 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 RPL18Q07020 188 aaKnown RBP12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 PIGFQ07326 219 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 TMEM249Q2WGJ8 235 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 LRRC23Q53EV4 343 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 CYB5R2Q6BCY4 276 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 TMEM53Q6P2H8 277 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 VHLLQ6RSH7 139 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 UGT2A3Q6UWM9 527 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 LSRQ86X29 649 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 HIPK1Q86Z02 1210 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 NKAIN4Q8IVV8 208 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 SKA3Q8IX90 412 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 SLC15A3Q8IY34 581 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 OR1J2Q8NGS2 313 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 RCN3Q96D15 328 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 TPD52L3Q96J77 140 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 PRRC1Q96M27 445 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 LRMDAQ9H2I8 198 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 KCNN2Q9H2S1 579 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 NOX3Q9HBY0 568 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 TMEM38BQ9NVV0 291 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 SLC7A8Q9UHI5 535 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 GPR160Q9UJ42 338 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 ALPK2Q86TB3 2170 aa12.57□□□□□ -0.4
NIF3L1-205ENST00000409588 ZNF503-AS2A6NEH8 195 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 VWC2LB2RUY7 222 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 MCIDASD6RGH6 385 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 hCG_2039718K7EN88 272 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 GSTA4O15217 222 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 SYNGR3O43761 229 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 CELA3BP08861 270 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 ACADSP16219 412 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 GIPRP48546 466 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 GZMKP49863 264 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 SMCPP49901 116 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 SELENOVP59797 346 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 PLP2Q04941 152 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 LIPEQ05469 1076 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 SNTB2Q13425 540 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 GKAP1Q5VSY0 366 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 FAM205BPQ63HN1 556 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 SPATA21Q7Z572 469 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 C1orf174Q8IYL3 243 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 TMEM255BQ8WV15 326 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 MCHR2Q969V1 340 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 BPIFA2Q96DR5 249 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 SORCS2Q96PQ0 1159 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 RBP7Q96R05 134 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 FNDC11Q9BVV2 318 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 TXNIPQ9H3M7 391 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 SIAEQ9HAT2 523 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 YAE1D1Q9NRH1 226 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 CMTM6Q9NX76 183 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 ZNF224Q9NZL3 707 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 ARMCX1Q9P291 453 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 HIF3AQ9Y2N7 669 aa12.56□□□□□ -0.4
NIF3L1-205ENST00000409588 TMEM129A0AVI4 362 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 CXCR6O00574 342 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 GIFP27352 417 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 GUCA1AP43080 201 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 RAD52P43351 418 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 NR4A2P43354 598 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 SLC9A3P48764 834 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 TRAM2Q15035 370 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 MOGQ16653 247 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 THEM4Q5T1C6 240 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 C10orf128Q5T292 105 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 UNQ6126/PRO20091Q6UXV3 157 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 CBLL1Q75N03 491 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 RRM2BQ7LG56 351 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 CYP4Z1Q86W10 505 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 OFCC1Q8IZS5 231 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 ZNF786Q8N393 782 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 GEMIN6Q8WXD5 167 aaKnown RBP12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 ASB10Q8WXI3 467 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 MRPL24Q96A35 216 aaKnown RBP12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 ANKRD19PQ9H560 264 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms