RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TMEM82A0PJX8 343 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 OR2T1O43869 369 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 RAB3DO95716 219 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 HLA-DQA2P01906 255 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 MGMTP16455 207 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 AVPR2P30518 371 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 PRKAR1BP31321 381 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 PTGFRP43088 359 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 PRKXP51817 358 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 ACTA2P62736 377 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 ACTG2P63267 376 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 EXOSC7Q15024 291 aaKnown RBP12.62□□□□□ -0.39
SDC1-202ENST00000381150 ELFN2Q5R3F8 820 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 TMEM184AQ6ZMB5 413 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 STAC2Q6ZMT1 411 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 OR2L3Q8NG85 312 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 TCEAL3Q969E4 200 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 ELSPBP1Q96BH3 223 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 ZNF285Q96NJ3 590 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 GAS2L1Q99501 681 aaPredicted RBP12.62□□□□□ -0.39
SDC1-202ENST00000381150 APOOQ9BUR5 198 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 TMPRSS13Q9BYE2 586 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 PARP12Q9H0J9 701 aaKnown RBP12.62□□□□□ -0.39
SDC1-202ENST00000381150 INPP5EQ9NRR6 644 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 MKL2Q9ULH7 1088 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 RPH3AQ9Y2J0 694 aaPredicted RBP12.62□□□□□ -0.39
SDC1-202ENST00000381150 ZNF281Q9Y2X9 895 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 GP1BAP07359 652 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 OR4E1P0C645 316 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 SLC6A6P31641 620 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 PRSS3P35030 304 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 TMEM196Q5HYL7 178 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 ALG10BQ5I7T1 473 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 KRBOX4Q5JUW0 171 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
SDC1-202ENST00000381150 STEAP1BQ6NZ63 245 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 ETV3LQ6ZN32 361 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 YAF2Q8IY57 180 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 RAB42Q8N4Z0 105 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 OR51A4Q8NGJ6 313 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 HAVCR1Q96D42 359 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 PRSS27Q9BQR3 290 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 APMAPQ9HDC9 416 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 MED9Q9NWA0 146 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 COA4Q9NYJ1 87 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 TRIOO75962 3097 aa12.62□□□□□ -0.39
SDC1-202ENST00000381150 DUXAA6NLW8 204 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 GAAP10253 952 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 AKR1C4P17516 323 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 TNFRSF4P43489 277 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 SEC13P55735 322 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 PPP2CBP62714 309 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 PPP2CAP67775 309 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 AIMP2Q13155 320 aaKnown RBP12.61□□□□□ -0.39
SDC1-202ENST00000381150 SGCGQ13326 291 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 EIF2B1Q14232 305 aaKnown RBP12.61□□□□□ -0.39
SDC1-202ENST00000381150 OR10K2Q6IF99 312 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 GPN3Q9UHW5 284 aaPredicted RBP12.61□□□□□ -0.39
SDC1-202ENST00000381150 SPAG17Q6Q759 2223 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 RFPL4AA6NLU0 287 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 RFPL4AL1F8VTS6 287 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 RNGTTO60942 597 aaKnown RBP12.61□□□□□ -0.39
SDC1-202ENST00000381150 ZNF254O75437 659 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 IL5P05113 134 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 AKAIN1P0CW23 69 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 CCKBRP32239 447 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 GABRA3P34903 492 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 ADPRHP54922 357 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 PPIAP62937 165 aaKnown RBP12.61□□□□□ -0.39
SDC1-202ENST00000381150 ZNF425Q6IV72 752 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 PLPP7Q8NBV4 271 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 OR4E2Q8NGC2 313 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 OR5AK2Q8NH90 309 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 OR14C36Q8NHC7 312 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 NUBPLQ8TB37 319 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 ZC3H10Q96K80 434 aaKnown RBP12.61□□□□□ -0.39
SDC1-202ENST00000381150 SPSB2Q99619 263 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 RSRP1Q9BUV0 290 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 RAB11FIP5Q9BXF6 653 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 ZNF350Q9GZX5 532 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 URB1O60287 2271 aaKnown RBP12.61□□□□□ -0.39
SDC1-202ENST00000381150 TRAV8-7A0A075B6U6 113 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3EA0A087X179 549 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 FITM1A5D6W6 292 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 MCIDASD6RGH6 385 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 CTDSPLO15194 276 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 AQP8O94778 261 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 EML2O95834 649 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 LBX1P52954 281 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 SNRPNP63162 240 aaKnown RBP12.61□□□□□ -0.39
SDC1-202ENST00000381150 C3orf33Q6P1S2 294 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 ZNF227Q86WZ6 799 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 GATSQ8NAP1 163 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 OR4S1Q8NGB4 309 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 C14orf79Q96F83 325 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 GABRG3Q99928 467 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 C20orf24Q9BUV8 137 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 FGF22Q9HCT0 170 aa12.61□□□□□ -0.39
SDC1-202ENST00000381150 APOBEC3BQ9UH17 382 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms