RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FNDC9Q8TBE3 224 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 BANF2Q9H503 90 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 TSC2P49815 1807 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 IGLV3-16A0A075B6K0 115 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 OR8U9P0C7N5 309 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 CBR1P16152 277 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 TAGLNQ01995 201 aaKnown RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 RUNX2Q13950 521 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ZBTB37Q5TC79 503 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 AGBL4Q5VU57 503 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 Q6ZTK2 550 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 FAM160A2Q8N612 972 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF680Q8NEM1 530 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 OR13C9Q8NGT0 318 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF587Q96SQ5 575 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 NKX6-2Q9C056 277 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SERTAD2Q14140 314 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF628Q5EBL2 1059 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 MAMSTRQ6ZN01 415 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 RHOUQ7L0Q8 258 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 CMIPQ8IY22 773 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 MAP3K3Q99759 626 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF346Q9UL40 294 aaKnown RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 EXO1Q9UQ84 846 aaKnown RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ENTPD2Q9Y5L3 495 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SNAPINO95295 136 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 C9orf135Q5VTT2 229 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 KIAA0895LQ68EN5 471 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 NHLRC1Q6VVB1 395 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 STAC2Q6ZMT1 411 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SGPP2Q8IWX5 399 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SLC6A18Q96N87 628 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 MRI1Q9BV20 369 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SEMA6CQ9H3T2 930 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 HHLA2Q9UM44 414 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 AIPO00170 330 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 CALCBP10092 127 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 EDN3P14138 238 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 CSRP3P50461 194 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SEC61A1P61619 476 aaKnown RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 LSM11P83369 360 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SVBPQ8N300 66 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SMIM19Q96E16 107 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SIRT3Q9NTG7 399 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 FBXO34Q9NWN3 711 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 FBXO4Q9UKT5 387 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 MRPS28Q9Y2Q9 187 aaKnown RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 CSAG2Q9Y5P2 127 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SLC22A7Q9Y694 548 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 TRAV36DV7A0A075B6V5 113 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 FAM189A2Q15884 450 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 KIAA1958Q8N8K9 716 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 BORCS8Q96FH0 119 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF304Q9HCX3 659 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 DHCR7Q9UBM7 475 aaKnown RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 DAPP1Q9UN19 280 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 C19orf53Q9UNZ5 99 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 PCDHGA1Q9Y5H4 931 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 FITM1A5D6W6 292 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 NPC1O15118 1278 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SEMG1P04279 462 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 GIPP09681 153 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SLC35E2P0CK97 266 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 EPXP11678 715 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 NID1P14543 1247 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 MVDP53602 400 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 GPR157Q5UAW9 335 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF695Q8IW36 515 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SULF2Q8IWU5 870 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 GPR137CQ8N3F9 429 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 C17orf47Q8NEP4 570 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 RSC1A1Q92681 617 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 GPATCH2Q9NW75 528 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 SLCO1C1Q9NYB5 712 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 KCNG2Q9UJ96 466 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF223Q9UK11 482 aaPredicted RBP5.99□□□□□ -1.45
SMC1A-202ENST00000375340 FOXJ3Q9UPW0 622 aa5.99□□□□□ -1.45
SMC1A-202ENST00000375340 RLFQ13129 1914 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 MYO7AQ13402 2215 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 POM121BA6NF01 834 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 LEUTXA8MZ59 168 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 GABARAPH6UMI1 98 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 TP53I11O14683 189 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 LPLP06858 475 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SLC2A1P11166 492 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 TNFRSF4P43489 277 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CAPZA1P52907 286 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CLDN17P56750 224 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 LINC00303Q3SY05 128 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 OR14L1PQ8NHC6 308 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 TRMT61AQ96FX7 289 aaKnown RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 TCTN2Q96GX1 697 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 NAA11Q9BSU3 229 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 ADGRL4Q9HBW9 690 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 TSPAN11A1L157 253 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 LCATP04180 440 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 OMGP23515 440 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 OR1D5P58170 312 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SNRPNP63162 240 aaKnown RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PLA2G7Q13093 441 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms