RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TNFRSF12AQ9NP84 129 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 NDRG3Q9UGV2 375 aa13.11□□□□□ -0.31
LMX1B-202ENST00000373474 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF587BE7ETH6 402 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 SLC6A12P48065 614 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF239Q16600 458 aaKnown RBP13.1□□□□□ -0.31
LMX1B-202ENST00000373474 COL13A1Q5TAT6 717 aaPredicted RBP13.1□□□□□ -0.31
LMX1B-202ENST00000373474 FBXO46Q6PJ61 603 aaPredicted RBP13.1□□□□□ -0.31
LMX1B-202ENST00000373474 FAM57BQ71RH2 274 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF610Q8N9Z0 462 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 NKX3-1Q99801 234 aaPredicted RBP13.1□□□□□ -0.31
LMX1B-202ENST00000373474 DHRS9Q9BPW9 319 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 TMPRSS5Q9H3S3 457 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 SSC5DA1L4H1 1573 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 CDC14CA4D256 554 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 SEC14L6B5MCN3 397 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 LAMTOR5O43504 91 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 IGLV3-27P01718 113 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 MISPQ8IVT2 679 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 METTL9Q9H1A3 318 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 SMLR1H3BR10 107 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 YY2O15391 372 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 LGI1O95970 557 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 CD79AP11912 226 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 BAXQ07812 192 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 SYT14P1Q58G82 188 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 OPN5Q6U736 354 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 PRR18Q8N4B5 295 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 IL22RA1Q8N6P7 574 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 KLHDC1Q8N7A1 406 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 ZIC5Q96T25 663 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 CDCA4Q9BXL8 241 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 KIR3DX1Q9H7L2 352 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 NDUFB11Q9NX14 153 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 ITGB8P26012 769 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 MRPS21P82921 87 aaKnown RBP13.1□□□□□ -0.31
LMX1B-202ENST00000373474 H3F3AP84243 136 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 WDR5BQ86VZ2 330 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 STACQ99469 402 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 ARV1Q9H2C2 271 aa13.1□□□□□ -0.31
LMX1B-202ENST00000373474 TMEM202A6NGA9 273 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 GALR3O60755 368 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 UTS2O95399 124 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 OLFM2O95897 454 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 SLC35E2P0CK97 266 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 MKXQ8IYA7 352 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF561Q8N587 486 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 NLGN4YQ8NFZ3 816 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 NXF5Q9H1B4 397 aaKnown RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF331Q9NQX6 463 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 NHSL1Q5SYE7 1610 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 RFX2P48378 723 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 VEGFBP49765 207 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 KIAA1024LP59773 190 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ASAH1Q13510 395 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 PFN4Q8NHR9 129 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 UBL7Q96S82 380 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ZNF251Q9BRH9 671 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 VN1R3Q9BXE9 311 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 HMGN4O00479 90 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 OR2F2O95006 317 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 OR2F1Q13607 317 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ZFAND5O76080 213 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 SIX6O95475 246 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 HMGA1P17096 107 aaKnown RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 SRMP19623 302 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ARRB2P32121 409 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 SLC19A1P41440 591 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 CCR6P51684 374 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 CCR9P51686 369 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 GLYR1Q49A26 553 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 DHRS4L2Q6PKH6 230 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 LANCL3Q6ZV70 420 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 MOB3CQ70IA8 216 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 BPHLQ86WA6 291 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 RBM45Q8IUH3 476 aaKnown RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 PCNPQ8WW12 178 aaKnown RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-202ENST00000373474 ASB1Q9Y576 335 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 F10P00742 488 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 AADACP22760 399 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 SLC35D2Q76EJ3 337 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 SLC35B4Q969S0 331 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 TMEM18Q96B42 140 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 SEC22AQ96IW7 307 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 C1orf198Q9H425 327 aa13.09□□□□□ -0.31
LMX1B-202ENST00000373474 PRAMEF27A3QJZ7 478 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 TRIM77I1YAP6 450 aa13.08□□□□□ -0.32
LMX1B-202ENST00000373474 POU3F2P20265 443 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms