RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ZNF559Q9BR84 538 aa6.33□□□□□ -1.4
USP1-202ENST00000371146 TGIF2Q9GZN2 237 aa6.33□□□□□ -1.4
USP1-202ENST00000371146 UNKLQ9H9P5 680 aaKnown RBP6.33□□□□□ -1.4
USP1-202ENST00000371146 AKIP1Q9NQ31 210 aa6.33□□□□□ -1.4
USP1-202ENST00000371146 PLCXD1Q9NUJ7 323 aa6.33□□□□□ -1.4
USP1-202ENST00000371146 ICAM5Q9UMF0 924 aa6.33□□□□□ -1.4
USP1-202ENST00000371146 ZNF443Q9Y2A4 671 aaPredicted RBP6.33□□□□□ -1.4
USP1-202ENST00000371146 MED31Q9Y3C7 131 aa6.33□□□□□ -1.4
USP1-202ENST00000371146 ANKRD17O75179 2603 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 A0A1W2PPW3 197 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FRG2CA6NGY1 282 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 KDM4EB2RXH2 506 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 M0R082 166 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 M0R1B8 84 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 SMAD7O15105 426 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 SLC31A2O15432 143 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 DEAF1O75398 565 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 GOSR1O95249 250 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 LCKP06239 509 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ELAVL4P26378 380 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 AQP2P41181 271 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 KIR3DL2P43630 455 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 CTXN1P60606 82 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 OR1Q1Q15612 314 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 SYT14P1Q58G82 188 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ENTPD8Q5MY95 495 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 C1orf185Q5T7R7 199 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 AGAP6Q5VW22 663 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 RAB12Q6IQ22 244 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 MSANTD1Q6ZTZ1 278 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 GPALPP1Q8IXQ4 340 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 OR9Q1Q8NGQ5 310 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ZNF417Q8TAU3 575 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 SGTBQ96EQ0 304 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 RNF170Q96K19 258 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ZNF587Q96SQ5 575 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 NUDT16L1Q9BRJ7 211 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 C1QTNF3Q9BXJ4 246 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 UGT2B28Q9BY64 529 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 POLDIP3Q9BY77 421 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 RIMS4Q9H426 269 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 SIRT3Q9NTG7 399 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 RIMS3Q9UJD0 308 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 IKZF2Q9UKS7 526 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 CORO2BQ9UQ03 480 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 GRIP1Q9Y3R0 1128 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 AP4B1Q9Y6B7 739 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 A8MXE2 369 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ZNF780AO75290 641 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 TGM6O95932 706 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 COX6B1P14854 86 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 HTR1EP28566 365 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 CLRN1P58418 232 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FUT7Q11130 342 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FADDQ13158 208 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 KEAP1Q14145 624 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 PIGGQ5H8A4 983 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 TYW3Q6IPR3 259 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 ZNF836Q6ZNA1 936 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 CREB3L2Q70SY1 520 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 BATF2Q8N1L9 274 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 OR8J2Q8NGG1 315 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 TIMP4Q99727 224 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 PROCRQ9UNN8 238 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 KCNK7Q9Y2U2 307 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 SPIN1Q9Y657 262 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 HSPE1-MOB4S4R3N1 261 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 MEX3AA1L020 520 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 TVP23AA6NH52 213 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FAM183AA6NL82 134 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ZNF879B4DU55 563 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ZNF195O14628 629 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ARPC2O15144 300 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FMO6PO60774 539 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FCER2P06734 321 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 MRPL3P09001 348 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 FBP1P09467 338 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 GNAO1P09471 354 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FAM157BP0CG42 384 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 DRD5P21918 477 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 PEX2P28328 305 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 GRNP28799 593 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 ZFP36L2P47974 494 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 P2RX1P51575 399 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 GBX2P52951 348 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 TXNL4AP83876 142 aaKnown RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 HSF2Q03933 536 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FOXF2Q12947 444 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 LBHQ53QV2 105 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 SPATA46Q5T0L3 261 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ZFP1Q6P2D0 407 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 WDR73Q6P4I2 378 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 VWA1Q6PCB0 445 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 DEGS2Q6QHC5 323 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 ZDHHC13Q8IUH4 622 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 OR2L13Q8N349 312 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 IQCF1Q8N6M8 205 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 FAM86B1Q8N7N1 296 aa6.32□□□□□ -1.4
USP1-202ENST00000371146 NFAM1Q8NET5 270 aaPredicted RBP6.32□□□□□ -1.4
USP1-202ENST00000371146 OR9Q2Q8NGE9 314 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms