RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 OR6T1Q8NGN1 323 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 OR5W2Q8NH69 310 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 NFKBIDQ8NI38 313 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 BCAS4Q8TDM0 211 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 GPR119Q8TDV5 335 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 CAPSLQ8WWF8 208 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 PTH2Q96A98 100 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 RGMAQ96B86 450 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 DHX58Q96C10 678 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 RASD2Q96D21 266 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 SNF8Q96H20 258 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 OR8B2Q96RD0 313 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 GPX7Q96SL4 187 aaPredicted RBP1.2□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF426Q9BUY5 554 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 SLC7A5P2Q9GIP4 190 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 FAM107BQ9H098 131 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 RGCCQ9H4X1 137 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 HAUS4Q9H6D7 363 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 LIN7CQ9NUP9 197 aaKnown RBP1.2□□□□□ -2.22
LINC00643-201ENST00000334389 MAT2BQ9NZL9 334 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 ATP6V1HQ9UI12 483 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 SHOC2Q9UQ13 582 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 KCNK6Q9Y257 313 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 MYO18AQ92614 2054 aaKnown RBP1.2□□□□□ -2.22
LINC00643-201ENST00000334389 RP1P56715 2156 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 MYO9BQ13459 2157 aa1.2□□□□□ -2.22
LINC00643-201ENST00000334389 hCG_1818297A0A087WSY0 165 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 WI2-2373I1.2A0A1W2PRP0 233 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR6C68A6NDL8 312 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FTCDNL1E5RQL4 147 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NPFFO15130 113 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 SORBS3O60504 671 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RBBP9O75884 186 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LCATP04180 440 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ENO1P06733 434 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 HMBSP08397 361 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MMP7P09237 267 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CFC1P0CG37 223 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 GP9P14770 177 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NCF2P19878 526 aaPredicted RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 GSTM3P21266 225 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TNFSF4P23510 183 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CRHBPP24387 322 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MSNP26038 577 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MAPK1P28482 360 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 DCTDP32321 178 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 BDKRB1P46663 353 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CASP4P49662 377 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CHMP4BP1P59074 171 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 KRTAP10-2P60368 255 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PCBD1P61457 104 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 B2MP61769 119 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LSM6P62312 80 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MRPS34P82930 218 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PMP22Q01453 160 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 BDH1Q02338 343 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CBFBQ13951 182 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MESDQ14696 234 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NPTX1Q15818 432 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LRRC36Q1X8D7 754 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ANKRD55Q3KP44 614 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ATAD3BQ5T9A4 648 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 INTS11Q5TA45 600 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 C18orf63Q68DL7 685 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LCN12Q6JVE5 192 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC144NLQ6NUI1 221 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FDX2Q6P4F2 183 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LRRC8BQ6P9F7 803 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 VWA1Q6PCB0 445 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 LCNL1Q6ZST4 164 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TMPPEQ6ZT21 453 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 GRINAQ7Z429 371 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 C17orf64Q86WR6 236 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NUDT13Q86X67 352 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MREGQ8N565 214 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NPBQ8NG41 125 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR4X2Q8NGF9 303 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR52E2Q8NGJ4 325 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR6X1Q8NH79 312 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR2T6Q8NHC8 308 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CDKL2Q92772 493 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MED30Q96HR3 178 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RHOVQ96L33 236 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 OR2V2Q96R30 315 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 ARPC5LQ9BPX5 153 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TBL1YQ9BQ87 522 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TMEM246Q9BRR3 403 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 DCTN5Q9BTE1 182 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 PANK2Q9BZ23 570 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 TRIM5Q9C035 493 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 VCX3BQ9H321 246 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 RNF167Q9H6Y7 350 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 METTL8Q9H825 291 aaKnown RBP1.19□□□□□ -2.22
LINC00643-201ENST00000334389 NANSQ9NR45 359 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 FAM49BQ9NUQ9 324 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 AHSPQ9NZD4 102 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MPP6Q9NZW5 540 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 MID2Q9UJV3 735 aa1.19□□□□□ -2.22
LINC00643-201ENST00000334389 CAMK2AQ9UQM7 478 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms