RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TMEM201Q5SNT2 666 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 PAPD4Q6PIY7 484 aaKnown RBP12.89□□□□□ -0.35
EPHB3-201ENST00000330394 CD300LGQ6UXG3 332 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 STAC2Q6ZMT1 411 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 CAMKMTQ7Z624 323 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 EID2Q8N6I1 236 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 OR1F2PQ96R84 312 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 ETV7Q9Y603 341 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 COL4A5P29400 1685 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 LOC100289279A0A1B0GTE1 492 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 TRIM77I1YAP6 450 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 CDC42EP2O14613 210 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 SLC36A2Q495M3 483 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 Q5BKY6 102 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 GPA33Q99795 319 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
EPHB3-201ENST00000330394 CHRDQ9H2X0 955 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 SAGE1Q9NXZ1 904 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 SLC22A13Q9Y226 551 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 A0A1W2PS29 197 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 GLCEO94923 617 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 NSA2O95478 260 aaKnown RBP12.88□□□□□ -0.35
EPHB3-201ENST00000330394 IFNA5P01569 189 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 LPLP06858 475 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 OR13C7P0DN81 318 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 SLC2A1P11166 492 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 C5AR1P21730 350 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 CRABP1P29762 137 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 AVPR2P30518 371 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 CSRP3P50461 194 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 POU3F1Q03052 451 aaPredicted RBP12.88□□□□□ -0.35
EPHB3-201ENST00000330394 IAH1Q2TAA2 248 aaPredicted RBP12.88□□□□□ -0.35
EPHB3-201ENST00000330394 ZNF765Q7L2R6 523 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 MARCH3Q86UD3 253 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 FRMD1Q8N878 549 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 NUDCD2Q8WVJ2 157 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 WDR76Q9H967 626 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 PRELID3BQ9Y3B1 194 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 WBP2NLQ6ICG8 309 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 GLDNQ6ZMI3 551 aaPredicted RBP12.88□□□□□ -0.35
EPHB3-201ENST00000330394 FGGYQ96C11 551 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 ARL5BQ96KC2 179 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 CPNE7Q9UBL6 633 aa12.88□□□□□ -0.35
EPHB3-201ENST00000330394 CPED1A4D0V7 1026 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 MCRIP1C9JLW8 97 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 ABLIM3O94929 683 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 EIF2S3P41091 472 aaKnown RBP12.87□□□□□ -0.35
EPHB3-201ENST00000330394 BDH1Q02338 343 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 SOHLH1Q5JUK2 328 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 EEF1A1P5Q5VTE0 462 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 DPY19L2P2Q6ZN68 376 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 ACOT7LQ6ZUV0 252 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 KLHDC8BQ8IXV7 354 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 MFSD9Q8NBP5 474 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 GLYATL2Q8WU03 294 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 PHYHIPQ92561 330 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 PELI1Q96FA3 418 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 SENP5Q96HI0 755 aaPredicted RBP12.87□□□□□ -0.35
EPHB3-201ENST00000330394 LMF2Q9BU23 707 aaKnown RBP12.87□□□□□ -0.35
EPHB3-201ENST00000330394 UNKLQ9H9P5 680 aaKnown RBP12.87□□□□□ -0.35
EPHB3-201ENST00000330394 LUZP4Q9P127 313 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 HIDE1A8MVS5 230 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 EPHA1P21709 976 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 SSX9Q7RTT3 188 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 CLCC1Q96S66 551 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 PDE7BQ9NP56 450 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 NTMQ9P121 344 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 A0A1B0GTH9 108 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
EPHB3-201ENST00000330394 SERPINF1P36955 418 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 DIO1P49895 249 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 HTRA3P83110 453 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 C2orf76Q3KRA6 126 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 METRNLQ641Q3 311 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 NAA40Q86UY6 237 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 DAZLQ92904 295 aaKnown RBP12.87□□□□□ -0.35
EPHB3-201ENST00000330394 NRSN2Q9GZP1 204 aa12.87□□□□□ -0.35
EPHB3-201ENST00000330394 MBNL1Q9NR56 388 aaKnown RBP12.87□□□□□ -0.35
EPHB3-201ENST00000330394 SERINC4A6NH21 518 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 VSTM2BA6NLU5 285 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SNRPGP15A8MWD9 76 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 CDK2AP1O14519 115 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 CCINQ13939 588 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 CLINT1Q14677 625 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 KIR2DS3Q14952 304 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 RSU1Q15404 277 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 IGSF11Q5DX21 431 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 RASGRP3Q8IV61 690 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 MUC20Q8N307 709 aaPredicted RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 BPIFCQ8NFQ6 507 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 OR4S1Q8NGB4 309 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SDHCQ99643 169 aaPredicted RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SLC25A32Q9H2D1 315 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 BANF2Q9H503 90 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 EPHX3Q9H6B9 360 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 IFT22Q9H7X7 185 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms