RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TRAF3IP2O43734 574 aaPredicted RBP12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 IGHV4-38-2P0DP08 117 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 BMP2P12643 396 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 SLC6A2P23975 617 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 MAGEB1P43366 347 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 IDH2P48735 452 aaKnown RBP12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 CLK1P49759 484 aaKnown RBP12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 H3F3AP84243 136 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 CYLC2Q14093 348 aaPredicted RBP12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 PAGE3Q5JUK9 113 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 REEP3Q6NUK4 255 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 HMGN2P46Q86SG4 172 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 DHDDSQ86SQ9 333 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 LRP11Q86VZ4 500 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 PARP8Q8N3A8 854 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 DPP10Q8N608 796 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 IL17RDQ8NFM7 739 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 ST7LQ8TDW4 575 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 CNOT9Q92600 299 aaKnown RBP12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 TMEM45BQ96B21 275 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 MRI1Q9BV20 369 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 CHIAQ9BZP6 476 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 NELFAQ9H3P2 528 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 CRLF2Q9HC73 371 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 BCL2L10Q9HD36 194 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 KLHL14Q9P2G3 628 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 GMEB1Q9Y692 573 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 PRORSD1PA6NEY8 169 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF587BE7ETH6 402 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 FAAHO00519 579 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 SERPINB7O75635 380 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 KRT33AO76009 404 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 C1QCP02747 245 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 ETS2P15036 469 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF12P17014 697 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 GPX2P18283 190 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 RPS4Y1P22090 263 aaKnown RBP12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 CRYBB2P43320 205 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 POLR2HP52434 150 aaKnown RBP12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 CDK6Q00534 326 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 NPRL3Q12980 569 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 SLC17A1Q14916 467 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 OXLD1Q5BKU9 147 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 MRPL2Q5T653 305 aaKnown RBP12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 FAM205BPQ63HN1 556 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 PCYOX1LQ8NBM8 494 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 BHLHE22Q8NFJ8 381 aaPredicted RBP12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 RAB1CQ92928 201 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 DDIT4LQ96D03 193 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 TIMD4Q96H15 378 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 CGREF1Q99674 301 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 MARCH7Q9H992 704 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 SLC25A37Q9NYZ2 338 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 VAPAQ9P0L0 249 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 CHRNA9Q9UGM1 479 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF346Q9UL40 294 aaKnown RBP12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 ANGPT4Q9Y264 503 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF443Q9Y2A4 671 aaPredicted RBP12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 HDGFL3Q9Y3E1 203 aa12.5□□□□□ -0.41
CTHRC1-201ENST00000330295 DSPPQ9NZW4 1301 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 CDHR4A6H8M9 788 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 CLDN24A6NM45 220 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 BBIP1A8MTZ0 92 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 SLC22A2O15244 555 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 DHHO43323 396 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 CCDC22O60826 627 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 NPPAP01160 153 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 CXCR1P25024 350 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 GLRXP35754 106 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 ARR3P36575 388 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 OR2B6P58173 313 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 CCL8P80075 99 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 TEKQ02763 1124 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 RBBP4Q09028 425 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 CYP51A1Q16850 503 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 RNF220Q5VTB9 566 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 DLEU7Q6UYE1 221 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 VRK2Q86Y07 508 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 SLC30A8Q8IWU4 369 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 C11orf65Q8NCR3 313 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 OR52E2Q8NGJ4 325 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 NFKBIDQ8NI38 313 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 MAL2Q969L2 176 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 SLC35B4Q969S0 331 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 ALKBH3Q96Q83 286 aaPredicted RBP12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 NSRP1Q9H0G5 558 aaKnown RBP12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 PRDM13Q9H4Q3 707 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 TMEM38AQ9H6F2 299 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 SLAMF8Q9P0V8 285 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 INSIG2Q9Y5U4 225 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 CAPN7Q9Y6W3 813 aa12.49□□□□□ -0.41
CTHRC1-201ENST00000330295 IGHV1-69-2A0A0G2JMI3 117 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 TRAPPC2LH3BP13 241 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 MPIG6BO95866 241 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 PLATP00750 562 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 HOXB9P17482 250 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms