RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 LAMTOR5O43504 91 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 KDM1AO60341 852 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 HMGN1P05114 100 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 NME1P15531 152 aaKnown RBP6.99□□□□□ -1.29
CNOT4-201ENST00000315544 AK4P27144 223 aaPredicted RBP6.99□□□□□ -1.29
CNOT4-201ENST00000315544 PBLDP30039 288 aaPredicted RBP6.99□□□□□ -1.29
CNOT4-201ENST00000315544 RPS7P62081 194 aaKnown RBP6.99□□□□□ -1.29
CNOT4-201ENST00000315544 ZNF273Q14593 569 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 EXOSC7Q15024 291 aaKnown RBP6.99□□□□□ -1.29
CNOT4-201ENST00000315544 NDUFAF6Q330K2 333 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 RNF128Q8TEB7 428 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 C17orf50Q8WW18 174 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 KTI12Q96EK9 354 aaPredicted RBP6.99□□□□□ -1.29
CNOT4-201ENST00000315544 SLC41A2Q96JW4 573 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 CXorf58Q96LI9 332 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 LINC00052Q96N35 136 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 NOX4Q9NPH5 578 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 EXTL2Q9UBQ6 330 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 SCP2D1Q9UJQ7 156 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 SLC9A8Q9Y2E8 581 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 CLCA3PQ9Y6N3 262 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 ARID1BQ8NFD5 2236 aaPredicted RBP6.99□□□□□ -1.29
CNOT4-201ENST00000315544 NPIPA5A0A0B4J1W7 369 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 CDRT15L2A8MXV6 281 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 NPIPA7E9PJI5 369 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 RAB27BO00194 218 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 CCNYL3P0C7X3 344 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 NPIPA8P0DM63 369 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 PPP3CBP16298 524 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 F8A1P23610 371 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 PPP2R1BP30154 601 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 ACSL1P33121 698 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 TAS2R43P59537 309 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 PRR5P85299 388 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 MELKQ14680 651 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 GRK1Q15835 563 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 KLHL12Q53G59 568 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 PABPC1L2AQ5JQF8 200 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 AADACL3Q5VUY0 350 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 TRIM48Q8IWZ4 208 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 OTOSQ8NHW6 89 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 XAGE5Q8WWM1 108 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 RFT1Q96AA3 541 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 DMRTB1Q96MA1 342 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 MIEF1Q9NQG6 463 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 ZNF319Q9P2F9 582 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 TNFRSF10DQ9UBN6 386 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 KCNK6Q9Y257 313 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 ZNF337Q9Y3M9 751 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 DUXAA6NLW8 204 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 DLGAP3O95886 979 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 STATHP02808 62 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 LPLP06858 475 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 ST6GAL1P15907 406 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 CDK2P24941 298 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 AZGP1P25311 298 aaKnown RBP6.99□□□□□ -1.29
CNOT4-201ENST00000315544 DCTDP32321 178 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 GDNFP39905 211 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 CD83Q01151 205 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 PHF19Q5T6S3 580 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 ASB18Q6ZVZ8 466 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 RHOUQ7L0Q8 258 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 FRMD1Q8N878 549 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 OR4K14Q8NGD5 310 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 OR5M9Q8NGP3 310 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 GPR148Q8TDV2 347 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 WDR76Q9H967 626 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 C14orf105Q9NVL8 296 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 IMPAD1Q9NX62 359 aa6.99□□□□□ -1.29
CNOT4-201ENST00000315544 A0A1W2PQU0 124 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 TCRBV21S2A2A0A5A6 115 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 B8ZZF3 427 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 PEX14O75381 377 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 NSA2O95478 260 aaKnown RBP6.98□□□□□ -1.29
CNOT4-201ENST00000315544 HSMCR30P0CW71 290 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 ACTC1P68032 377 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 ACTA1P68133 377 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 ZFP36L1Q07352 338 aaKnown RBP6.98□□□□□ -1.29
CNOT4-201ENST00000315544 RIPPLY1Q0D2K3 151 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 TAB1Q15750 504 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 TOMM34Q15785 309 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-201ENST00000315544 ZSWIM7Q19AV6 140 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 WDR38Q5JTN6 314 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 FAM69AQ5T7M9 428 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 PRSS42Q7Z5A4 293 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 HSD17B13Q7Z5P4 300 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-201ENST00000315544 OR51G2Q8NGK0 314 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 CAPSLQ8WWF8 208 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 WDR70Q9NW82 654 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 NUP50Q9UKX7 468 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 A0A1B0GVI7 797 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 C5orf63A6NC05 138 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 FRG2CA6NGY1 282 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 VSTM2BA6NLU5 285 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 NOL3O60936 208 aaKnown RBP6.98□□□□□ -1.29
CNOT4-201ENST00000315544 CRYZL1O95825 349 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 PAK4O96013 591 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-201ENST00000315544 PTHLHP12272 177 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 GIFP27352 417 aa6.98□□□□□ -1.29
CNOT4-201ENST00000315544 GDI2P50395 445 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms