RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SPNS1Q9H2V7 528 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 HDGFL3Q9Y3E1 203 aa16.2■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZNF780AO75290 641 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 FOLR1P15328 257 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 GM2AP17900 193 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 CXADRP78310 365 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 ALKBH1Q13686 389 aaKnown RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 SULF2Q8IWU5 870 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 COX14Q96I36 57 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 OXGR1Q96P68 337 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 FAM173AQ9BQD7 235 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 A0A0A6YYH2 397 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 A6NJ64 397 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 B8ZZF3 427 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 QDPRP09417 244 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 ARR3P36575 388 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 KIR2DL1P43626 348 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 LGALS4P56470 323 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 SYT14P1Q58G82 188 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 LRRC28Q86X40 367 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR6V1Q8N148 313 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 RGCCQ9H4X1 137 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 PRMT8Q9NR22 394 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 MRPS28Q9Y2Q9 187 aaKnown RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 SLC22A20A6NK97 555 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 HTR2CP28335 458 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 TEKQ02763 1124 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR1C1Q15619 314 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 ACBD4Q8NC06 268 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR4N2Q8NGD1 307 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR11A1Q9GZK7 315 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 IFNA1P01562 189 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 FAPQ12884 760 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 SSPNQ14714 243 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZNF169Q14929 603 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 SLC22A24Q8N4F4 322 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR11G2Q8NGC1 345 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 NDNFQ8TB73 568 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 RNF128Q8TEB7 428 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 KCTD12Q96CX2 325 aaKnown RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZNF649Q9BS31 505 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 DUSP15Q9H1R2 295 aaPredicted RBP16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 PSORS1C1Q9UIG5 152 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 ATP23Q9Y6H3 246 aa16.19■□□□□ 0.18
CDC42EP3-201ENST00000295324 TAS2R46P59540 309 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 PHYHIPQ92561 330 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 C7orf50Q9BRJ6 194 aaKnown RBP16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 CRLF2Q9HC73 371 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 FBXO4Q9UKT5 387 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 A0A1B0GTQ1 180 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 HTR2AP28223 471 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 PIGAP37287 484 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZXDAP98168 799 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 ACKR1Q16570 336 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 CLPPQ16740 277 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 THEM4Q5T1C6 240 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 MTFR2Q6P444 385 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 ARIH2OSQ8N7S6 290 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 NRIP3Q9NQ35 241 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 CHRNB1P11230 501 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 RFC3P40938 356 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 TAS2R19P59542 299 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 CATR1Q13166 79 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 H1FXQ92522 213 aaKnown RBP16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 NUDT9Q9BW91 350 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 PRDM7Q9NQW5 492 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 ARID1BQ8NFD5 2236 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 COL13A1Q5TAT6 717 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 OR2A2Q6IF42 318 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 FAM199XQ6PEV8 388 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 MEX3BQ6ZN04 569 aaKnown RBP16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 NUDT8Q8WV74 236 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 OVCH1Q7RTY7 1134 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 ZFAND2BQ8WV99 257 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 THAP7Q9BT49 309 aaPredicted RBP16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 PLEKHA3Q9HB20 300 aa16.18■□□□□ 0.18
CDC42EP3-201ENST00000295324 RNF212BA8MTL3 300 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 H3BMQ9 156 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 GAPDHSO14556 408 aaPredicted RBP16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 DSCR4P56555 118 aaPredicted RBP16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 FCRLAQ7L513 359 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 LRFN5Q96NI6 719 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 VN1R1Q9GZP7 353 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 SDHAF2Q9NX18 166 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 PCDHGA5Q9Y5G8 931 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 CPT2P23786 658 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 SDHAP31040 664 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 CAV2P51636 162 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 LTC4SQ16873 150 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 PLK5Q496M5 336 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 CCDC58Q4VC31 144 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 WFDC8Q8IUA0 241 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 ABHD4Q8TB40 342 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 TMIGD2Q96BF3 282 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 C1QTNF6Q9BXI9 259 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 IL7P13232 177 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 IDH3GP51553 393 aaPredicted RBP16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 YIF1BQ5BJH7 314 aa16.17■□□□□ 0.18
CDC42EP3-201ENST00000295324 METTL11BQ5VVY1 283 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms