RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 CT45A9P0DMV2 189 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 PRKACAP17612 351 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 GPR143P51810 404 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CTXN1P60606 82 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 EGR4Q05215 589 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 NR0B2Q15466 257 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 ZNF141Q15928 474 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 C2orf76Q3KRA6 126 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CT45A2Q5DJT8 189 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CBLN3Q6UW01 205 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.24□□□□□ -0.61
NUP88-201ENST00000225696 CDC20BQ86Y33 519 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 PLPP7Q8NBV4 271 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CLEC1AQ8NC01 280 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 OR6K3Q8NGY3 331 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 OR6N2Q8NGY6 317 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 SLC22A18Q96BI1 424 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 ZNF75AQ96N20 296 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 MNTQ99583 582 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 LMF2Q9BU23 707 aaKnown RBP11.24□□□□□ -0.61
NUP88-201ENST00000225696 PTDSS2Q9BVG9 487 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 BARX1Q9HBU1 254 aaPredicted RBP11.24□□□□□ -0.61
NUP88-201ENST00000225696 FAM60AQ9NP50 221 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 POLE3Q9NRF9 147 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.24□□□□□ -0.61
NUP88-201ENST00000225696 FANCMQ8IYD8 2048 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 A6NCN8 305 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 KCNAB3O43448 404 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 PLRG1O43660 514 aaKnown RBP11.24□□□□□ -0.61
NUP88-201ENST00000225696 DOK2O60496 412 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 EIF4E2O60573 245 aaKnown RBP11.24□□□□□ -0.61
NUP88-201ENST00000225696 KCNJ13O60928 360 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 SLC35E2P0CK97 266 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 LIPCP11150 499 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CSF2RBP32927 897 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CD226Q15762 336 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 MESTQ5EB52 335 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 SLC6A19Q695T7 634 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 ELP2Q6IA86 826 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 FAM220AQ7Z4H9 259 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 TMED4Q7Z7H5 227 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 JAZF1Q86VZ6 243 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 ZNF595Q8IYB9 648 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 SLC43A2Q8N370 569 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 GALNT16Q8N428 558 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CSNK1A1LQ8N752 337 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 OR10K1Q8NGX5 313 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 MCHR2Q969V1 340 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 GAS2L1Q99501 681 aaPredicted RBP11.24□□□□□ -0.61
NUP88-201ENST00000225696 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 TINAGL1Q9GZM7 467 aaPredicted RBP11.24□□□□□ -0.61
NUP88-201ENST00000225696 SLC22A13Q9Y226 551 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 SLC6A5Q9Y345 797 aa11.24□□□□□ -0.61
NUP88-201ENST00000225696 CCSO14618 274 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ALOX12BO75342 701 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ZNF254O75437 659 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 CSF1P09603 554 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 TACSTD2P09758 323 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 RPA2P15927 270 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ZNF10P21506 573 aaPredicted RBP11.23□□□□□ -0.61
NUP88-201ENST00000225696 BTG2P78543 158 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 DEFA5Q01523 94 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ENPP2Q13822 863 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ZNF74Q16587 644 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 WDR38Q5JTN6 314 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 SLC35D2Q76EJ3 337 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 RTL10Q7L3V2 364 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 NDUFAF7Q7L592 441 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ZNF550Q7Z398 422 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ZNF227Q86WZ6 799 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 EIF4E3Q8N5X7 224 aaKnown RBP11.23□□□□□ -0.61
NUP88-201ENST00000225696 PXT1Q8NFP0 134 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 BAHD1Q8TBE0 780 aaPredicted RBP11.23□□□□□ -0.61
NUP88-201ENST00000225696 PMM1Q92871 262 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 KTI12Q96EK9 354 aaPredicted RBP11.23□□□□□ -0.61
NUP88-201ENST00000225696 LRRC46Q96FV0 321 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 LPAR4Q99677 370 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 NPAS1Q99742 590 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 KCNG2Q9UJ96 466 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 LAMP5Q9UJQ1 280 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 WDFY3Q8IZQ1 3526 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 SERINC4A6NH21 518 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 NDUFA2O43678 99 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 WNT11O96014 354 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 PNPP00491 289 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 CD14P08571 375 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 OR4E1P0C645 316 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 AKAIN1P0CW23 69 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ALOX5APP20292 161 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 MAPK3P27361 379 aaPredicted RBP11.23□□□□□ -0.61
NUP88-201ENST00000225696 CCKBRP32239 447 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 FAUP35544 74 aaKnown RBP11.23□□□□□ -0.61
NUP88-201ENST00000225696 PRPS1P60891 318 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ALG10Q5BKT4 473 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ARHGAP40Q5TG30 622 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 LRRN1Q6UXK5 716 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
NUP88-201ENST00000225696 BCORP1Q8N888 145 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms