RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 KIR2DL3P43628 341 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 CASP7P55210 303 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 GLIS1Q8NBF1 620 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 NOX4Q9NPH5 578 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 FBXO34Q9NWN3 711 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 MROH2AA6NES4 1674 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 A0A1B0GVG6 124 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF727A8MUV8 499 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 HCRTO43612 131 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 CCL5P13501 91 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 C21orf33P30042 268 aaPredicted RBP13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 TBC1D28Q2M2D7 210 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 PODNL1Q6PEZ8 512 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 B3GNT8Q7Z7M8 397 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 C12orf49Q9H741 205 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 SLC22A11Q9NSA0 550 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 MEGF6O75095 1541 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 C5orf52A6NGY3 159 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 HSD17B1P14061 328 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 CCL14Q16627 93 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 TOR2AQ5JU69 321 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 C15orf52Q6ZUT6 534 aaKnown RBP13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 SYT9Q86SS6 491 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF573Q86YE8 665 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 OR52D1Q9H346 318 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 DCAF13Q9NV06 445 aaKnown RBP13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 NME4O00746 187 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 CSF3P09919 207 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 SLC25A6P12236 298 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 BMP2P12643 396 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 WDR5P61964 334 aaKnown RBP13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 TEX261Q6UWH6 196 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 WDR31Q8NA23 367 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 BHLHE23Q8NDY6 225 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 OR13D1Q8NGV5 346 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 MED30Q96HR3 178 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 MACROD1Q9BQ69 325 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 DMRT3Q9NQL9 472 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 U3KQ87 197 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 A0A0J9YY10 115 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 HEPACAM2A8MVW5 462 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 LYRM7Q5U5X0 104 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 OR5AR1Q8NGP9 310 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 FIBINQ8TAL6 211 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 TPSD1Q9BZJ3 242 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 GABRR3A8MPY1 467 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 GOSR1O95249 250 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 RPUSD3Q6P087 351 aaKnown RBP13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 VRK2Q86Y07 508 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 OR51H1Q8NH63 302 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 TIMM9Q9Y5J7 89 aa13.55□□□□□ -0.24
SPTLC2-201ENST00000216484 ZFAND5O76080 213 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 ADRB1P08588 477 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 ARNTP27540 789 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 LTB4RQ15722 352 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 DEFB133Q30KQ1 61 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 PSAPL1Q6NUJ1 521 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 Q6ZSR6 202 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 TMUB2Q71RG4 321 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 NRARPQ7Z6K4 114 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 SLC51BQ86UW2 128 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 TSLPQ969D9 159 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 ACSS1Q9NUB1 689 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 HRH3Q9Y5N1 445 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF320A2RRD8 509 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 GATMP50440 423 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 TMEM176BQ3YBM2 270 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 TCEAL8Q8IYN2 117 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 KMT2EQ8IZD2 1858 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 GJB5O95377 273 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 EMX1Q04741 257 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 MRPL2Q5T653 305 aaKnown RBP13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 MTMR14Q8NCE2 650 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 XYLT2Q9H1B5 865 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 DNMT3BQ9UBC3 853 aaKnown RBP13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 LCN6P62502 163 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 GLYATL3Q5SZD4 288 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 ACOT4Q8N9L9 421 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 CD200R1Q8TD46 325 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 RNF39Q9H2S5 420 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 NPAP1Q9NZP6 1156 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 CBLCQ9ULV8 474 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF217O75362 1048 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 S1PR4O95977 384 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 DCTP40126 519 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 SULT1A2P50226 295 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 TIGITQ495A1 244 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 PLXDC2Q6UX71 529 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 AMIGO3Q86WK7 504 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 AKIRIN1Q9H9L7 192 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF835Q9Y2P0 537 aa13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 ACOT6Q3I5F7 207 aaPredicted RBP13.54□□□□□ -0.24
SPTLC2-201ENST00000216484 PRAMEF25A6NGN4 478 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 NTSR1P30989 418 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PRAMEF5Q5TYX0 476 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PRAMEF6Q5VXH4 476 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 OR6V1Q8N148 313 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 RASD2Q96D21 266 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 CMTM3Q96MX0 182 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms