RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 CSNK1A1P48729 337 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 CDH12P55289 794 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 TMEM33P57088 247 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 MYBPC1Q00872 1141 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 GALK2Q01415 458 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 PUDPQ08623 228 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 OR1Q1Q15612 314 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 TSTQ16762 297 aaKnown RBP10.96□□□□□ -0.65
LINC00339-206ENST00000634451 RGS7BPQ6MZT1 257 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-206ENST00000634451 LRFN4Q6PJG9 635 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 CCDC36Q8IYA8 594 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 C10orf53Q8N6V4 93 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 LSMEM1Q8N8F7 131 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 ICA1LQ8NDH6 482 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 ADPRHL1Q8NDY3 354 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 SGMS2Q8NHU3 365 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 BBS10Q8TAM1 723 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 MGARPQ8TDB4 240 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC00339-206ENST00000634451 TMEM54Q969K7 222 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 ITCHQ96J02 903 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 HINT3Q9NQE9 182 aaKnown RBP10.96□□□□□ -0.65
LINC00339-206ENST00000634451 SDR39U1Q9NRG7 319 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-206ENST00000634451 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 CORINQ9Y5Q5 1042 aa10.96□□□□□ -0.65
LINC00339-206ENST00000634451 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-206ENST00000634451 WNK1Q9H4A3 2382 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 M0R3H8 397 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 TM9SF1O15321 606 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 AKAP8O43823 692 aaKnown RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 SNNO75324 88 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 FSHBP01225 129 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 IGHV2-5P01817 119 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 THY1P04216 161 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 SERPINA5P05154 406 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 ARAFP10398 606 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 BMP2P12643 396 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 PRKAR1BP31321 381 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 POLR2JP52435 117 aaKnown RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 UBA52P62987 128 aaKnown RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 ZP4Q12836 540 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 TNFAIP8L3Q5GJ75 292 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 SPATA46Q5T0L3 261 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 ACSM5Q6NUN0 579 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 UGT2A3Q6UWM9 527 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 USP51Q70EK9 711 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 USP43Q70EL4 1123 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 SLC22A24Q8N4F4 322 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 LRRC17Q8N6Y2 441 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 GLB1L3Q8NCI6 653 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 SLC30A7Q8NEW0 376 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 BHLHE22Q8NFJ8 381 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 MAELQ96JY0 434 aaKnown RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 LRR1Q96L50 414 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 C1orf147Q96MC9 270 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 RBM4Q9BWF3 364 aaKnown RBP10.95□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF416Q9BWM5 594 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 ASPNQ9BXN1 380 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 C12orf10Q9HB07 376 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 TMEM38BQ9NVV0 291 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 SLC7A8Q9UHI5 535 aa10.95□□□□□ -0.66
LINC00339-206ENST00000634451 IGLV3-9A0A075B6K5 115 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF726A6NNF4 738 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 C5orf58C9J3I9 102 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 UBL3O95164 117 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 LYPD3O95274 346 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 LCKP06239 509 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 IDO1P14902 403 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 MPV17P39210 176 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 RGS8P57771 180 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 RPS23P62266 143 aaKnown RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 LCN2P80188 198 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 MRPS11P82912 194 aaKnown RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 RBBP4Q09028 425 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 LRRC74AQ0VAA2 488 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 NPTX1Q15818 432 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 GCNT6Q5T4J0 391 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 ULK3Q6PHR2 472 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 DHRS4L2Q6PKH6 230 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 NET1Q7Z628 596 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 RBM45Q8IUH3 476 aaKnown RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 BCL6BQ8N143 479 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 SIGLECL1Q8N7X8 197 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 SMYD1Q8NB12 490 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 OR4K5Q8NGD3 323 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 OR4D11Q8NGI4 311 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 DNAJA4Q8WW22 397 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 ZMYND19Q96E35 227 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF385DQ9H6B1 395 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 ARMC7Q9H6L4 198 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 CACYBPQ9HB71 228 aaKnown RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 SSU72Q9NP77 194 aaKnown RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 B3GAT2Q9NPZ5 323 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 MRPL39Q9NYK5 338 aaKnown RBP10.94□□□□□ -0.66
LINC00339-206ENST00000634451 GLTPQ9NZD2 209 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 ZIM2Q9NZV7 527 aa10.94□□□□□ -0.66
LINC00339-206ENST00000634451 PRKDCP78527 4128 aaKnown RBP10.93□□□□□ -0.66
LINC00339-206ENST00000634451 IGHV1-69-2A0A0G2JMI3 117 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms