RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 DHDDSQ86SQ9 333 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 LINC01356Q8N9X3 169 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 TMEM54Q969K7 222 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 SLC25A44Q96H78 314 aaPredicted RBP16.26■□□□□ 0.19
CCDC43-205ENST00000592333 CGREF1Q99674 301 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 WFDC6Q9BQY6 131 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 ZNF426Q9BUY5 554 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 C1orf198Q9H425 327 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 KAT8Q9H7Z6 458 aaKnown RBP16.26■□□□□ 0.19
CCDC43-205ENST00000592333 NANSQ9NR45 359 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 MRGBPQ9NV56 204 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 ZNF224Q9NZL3 707 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 SLC7A8Q9UHI5 535 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 ZNF229Q9UJW7 825 aa16.26■□□□□ 0.19
CCDC43-205ENST00000592333 TRAPPC13A5PLN9 417 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 CENPBD1B2RD01 187 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 ANGPT2O15123 496 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 SERPINA5P05154 406 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 IGFBP1P08833 259 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-205ENST00000592333 ADRA2AP08913 450 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 IFNGR1P15260 489 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 B4GALT1P15291 398 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 MMEL1Q495T6 779 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 ENTPD8Q5MY95 495 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 LIPNQ5VXI9 398 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 SLC35D2Q76EJ3 337 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 CDK20Q8IZL9 346 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 SMYD1Q8NB12 490 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 OR6T1Q8NGN1 323 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 ADAMTS16Q8TE57 1224 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 ZNF566Q969W8 418 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 ZNF385DQ9H6B1 395 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 TAS2R5Q9NYW4 299 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 GLTPQ9NZD2 209 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 REV1Q9UBZ9 1251 aa16.25■□□□□ 0.19
CCDC43-205ENST00000592333 SH3PXD2BA1X283 911 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 SEC14L2O76054 403 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 FARS2O95363 451 aaKnown RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 IGF2P01344 180 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 OR8G3PP0DMU2 310 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 GIPRP48546 466 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 PTDSS1P48651 473 aaKnown RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 BIDP55957 195 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 PIGFQ07326 219 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 KRTAP24-1Q3LI83 254 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 GKAP1Q5VSY0 366 aaPredicted RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 ZCCHC24Q8N2G6 241 aaKnown RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 GPR32P1Q8NGA4 272 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 MAGEB18Q96M61 343 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 MRPL37Q9BZE1 423 aaKnown RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 POLR2J2Q9GZM3 115 aaKnown RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 POLR2J3Q9H1A7 115 aaKnown RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 INTS9Q9NV88 658 aaKnown RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 GPR160Q9UJ42 338 aa16.24■□□□□ 0.19
CCDC43-205ENST00000592333 ZNF346Q9UL40 294 aaKnown RBP16.24■□□□□ 0.19
CCDC43-205ENST00000592333 HMGB1P1B2RPK0 211 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-205ENST00000592333 LRRN3E7EW58 273 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 M0R3H8 397 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 PTHP01270 115 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 HIST1H2ABP04908 130 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 ASAH2BP0C7U1 165 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 ACHEP22303 614 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 APEX1P27695 318 aaKnown RBP16.23■□□□□ 0.19
CCDC43-205ENST00000592333 PCGF2P35227 344 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 DVL1P1P54792 670 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-205ENST00000592333 CDH15P55291 814 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 TMEM33P57088 247 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 NPTX1Q15818 432 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 CR1LQ2VPA4 569 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 CCDC80Q76M96 950 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 HIST3H2AQ7L7L0 130 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 HDDC2Q7Z4H3 204 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 SLC22A24Q8N4F4 322 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 RFLNBQ8N5W9 214 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 HIST1H2ACQ93077 130 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 SH3GL1Q99961 368 aa16.23■□□□□ 0.19
CCDC43-205ENST00000592333 TMEFF2Q9UIK5 374 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-205ENST00000592333 LRP5LA4QPB2 252 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 B4DSR2 109 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 RNF13O43567 381 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 LYPD3O95274 346 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 CH25HO95992 272 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 CD247P20963 164 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 SELENOVP59797 346 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 HIST3H3Q16695 136 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 RETREG3Q86VR2 466 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 SKA3Q8IX90 412 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 SLC26A7Q8TE54 656 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 RDH5Q92781 318 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 SOX7Q9BT81 388 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 TMEM38BQ9NVV0 291 aa16.22■□□□□ 0.19
CCDC43-205ENST00000592333 STX18Q9P2W9 335 aaKnown RBP16.22■□□□□ 0.19
CCDC43-205ENST00000592333 CPSF4LA6NMK7 179 aaKnown RBP16.21■□□□□ 0.19
CCDC43-205ENST00000592333 C11orf98E9PRG8 122 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 DHHO43323 396 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 SNAP29O95721 258 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 BCL10O95999 233 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 NPPAP01160 153 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 IGHG1P01857 330 aa16.21■□□□□ 0.19
CCDC43-205ENST00000592333 THY1P04216 161 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms