RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ARIH2OSQ8N7S6 290 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 ANKS4BQ8N8V4 417 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 PIK3C3Q8NEB9 887 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 SLC26A7Q8TE54 656 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 SLC47A1Q96FL8 570 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF75AQ96N20 296 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 OR2M2Q96R28 347 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 CCT8L2Q96SF2 557 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 SPATA5L1Q9BVQ7 753 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 MYLK2Q9H1R3 596 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 EVA1AQ9H8M9 152 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 SEC61A2Q9H9S3 476 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 CRLF2Q9HC73 371 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 B3GNT2Q9NY97 397 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 RPS6KB2Q9UBS0 482 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 SEC14L4Q9UDX3 406 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 SLC13A4Q9UKG4 626 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 KCNS2Q9ULS6 477 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 ARL2BPQ9Y2Y0 163 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 CORINQ9Y5Q5 1042 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9□□□□□ -0.975e-7■□□□□ 8.1
VPS4B-207ENST00000591519 SVEP1Q4LDE5 3571 aa9□□□□□ -0.97
VPS4B-207ENST00000591519 IGHV2OR16-5A0A0B4J2B6 119 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF503-AS2A6NEH8 195 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 M0QX08 132 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 M0R3H8 397 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 TPST2O60704 377 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 SERPINB7O75635 380 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 IGFBP1P08833 259 aaPredicted RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 CELA3BP08861 270 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 APEHP13798 732 aaKnown RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF16P17020 682 aaPredicted RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 GRPRP30550 384 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 PCGF2P35227 344 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 EVX1P49640 407 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 GZMMP51124 257 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 SLC7A2P52569 658 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 RBBP4Q09028 425 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 C1DQ13901 141 aaKnown RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 ALG10BQ5I7T1 473 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 FAM120AOSQ5T036 256 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 PIGWQ7Z7B1 504 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 MYPOPQ86VE0 399 aaPredicted RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 C20orf196Q8IYI0 205 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF786Q8N393 782 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 GPR137CQ8N3F9 429 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 SCAIQ8N9R8 606 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 BHLHE22Q8NFJ8 381 aaPredicted RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 OR8J3Q8NGG0 315 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 VANGL1Q8TAA9 524 aaPredicted RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 SH3GL1Q99961 368 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 WFDC6Q9BQY6 131 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 BPESC1Q9GZL8 116 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 DENND2DQ9H6A0 471 aaPredicted RBP8.99□□□□□ -0.97
VPS4B-207ENST00000591519 CMTM6Q9NX76 183 aa8.99□□□□□ -0.97
VPS4B-207ENST00000591519 A0A0B4J2E0 115 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 A0A1B0GX12 115 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 PRORSD1PA6NEY8 169 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 hCG_2039718K7EN88 272 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 AKAP8O43823 692 aaKnown RBP8.98□□□□□ -0.97
VPS4B-207ENST00000591519 MFN2O95140 757 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 TGFAP01135 160 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 ERCC1P07992 297 aaPredicted RBP8.98□□□□□ -0.97
VPS4B-207ENST00000591519 ZNF35P13682 527 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 HLA-DOBP13765 273 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 DAOP14920 347 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 SRD5A1P18405 259 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 NR4A1P22736 598 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 RGS8P57771 180 aaPredicted RBP8.98□□□□□ -0.97
VPS4B-207ENST00000591519 NCALDP61601 193 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 RIN1Q13671 783 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 OR1Q1Q15612 314 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 VMACQ2NL98 169 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 KRTAP24-1Q3LI83 254 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 IQCCQ4KMZ1 466 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 LRRC23Q53EV4 343 aaPredicted RBP8.98□□□□□ -0.97
VPS4B-207ENST00000591519 PHYHD1Q5SRE7 291 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 VHLLQ6RSH7 139 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 PXKQ7Z7A4 578 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 MDP1Q86V88 176 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 CALHM3Q86XJ0 350 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 TAMM41Q96BW9 452 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 CMTM5Q96DZ9 223 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 C1orf159Q96HA4 380 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 EPYCQ99645 322 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 TMEM43Q9BTV4 400 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 EFCAB1Q9HAE3 211 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 TMEM27Q9HBJ8 222 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 BRD7Q9NPI1 651 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 ARL8BQ9NVJ2 186 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 MRPL39Q9NYK5 338 aaKnown RBP8.98□□□□□ -0.97
VPS4B-207ENST00000591519 TESQ9UGI8 421 aaKnown RBP8.98□□□□□ -0.97
VPS4B-207ENST00000591519 NOX1Q9Y5S8 564 aa8.98□□□□□ -0.97
VPS4B-207ENST00000591519 CPSF4LA6NMK7 179 aaKnown RBP8.97□□□□□ -0.97
VPS4B-207ENST00000591519 FAM220BPB1ANY3 271 aa8.97□□□□□ -0.97
VPS4B-207ENST00000591519 M0R3G1 203 aa8.97□□□□□ -0.97
VPS4B-207ENST00000591519 NME4O00746 187 aa8.97□□□□□ -0.97
VPS4B-207ENST00000591519 PLPP3O14495 311 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms