RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 OR10A6Q8NH74 314 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 ADAMTS16Q8TE57 1224 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 TAMM41Q96BW9 452 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 KAT8Q9H7Z6 458 aaKnown RBP18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 NANSQ9NR45 359 aa18.24■□□□□ 0.51
CHRNB1-206ENST00000574054 LRP5LA4QPB2 252 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 TRAPPC13A5PLN9 417 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 UBL3O95164 117 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 LYPD3O95274 346 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 THY1P04216 161 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 HIST1H2ABP04908 130 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 UMPSP11172 480 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF14P17017 642 aaPredicted RBP18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 HNF1AP20823 631 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 CD247P20963 164 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 RAB1AP62820 205 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 GALK2Q01415 458 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 FAM120AOSQ5T036 256 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 INTS11Q5TA45 600 aaKnown RBP18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 HIST3H2AQ7L7L0 130 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 HDXQ7Z353 690 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 UBASH3BQ8TF42 649 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 HIST1H2ACQ93077 130 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 MRPL24Q96A35 216 aaKnown RBP18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 MRPL37Q9BZE1 423 aaKnown RBP18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 GLTPQ9NZD2 209 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF224Q9NZL3 707 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 SVEP1Q4LDE5 3571 aa18.23■□□□□ 0.51
CHRNB1-206ENST00000574054 GIFP27352 417 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 MELKQ14680 651 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 RAB39AQ14964 217 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 MSMPQ1L6U9 139 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 LRRC17Q8N6Y2 441 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 OR6X1Q8NH79 312 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 TSPEARQ8WU66 669 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 TMEM54Q969K7 222 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 SYT3Q9BQG1 590 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 DENND2DQ9H6A0 471 aaPredicted RBP18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 TAS2R5Q9NYW4 299 aa18.22■□□□□ 0.51
CHRNB1-206ENST00000574054 LYNX1G3V0Z9 82 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 SYNGR3O43761 229 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 EDF1O60869 148 aaKnown RBP18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 IGFBP1P08833 259 aaPredicted RBP18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 PATE4P0C8F1 98 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 LYNX1P0DP58 116 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF35P13682 527 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 LSP1P33241 339 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 CHN2P52757 468 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 RPS23P62266 143 aaKnown RBP18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 PIWIL3Q7Z3Z3 882 aaKnown RBP18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 NANOGNBQ7Z5D8 188 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 TSPYL5Q86VY4 417 aaPredicted RBP18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF786Q8N393 782 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF566Q969W8 418 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 MPP4Q96JB8 637 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF75AQ96N20 296 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 SNX18Q96RF0 628 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 SOX7Q9BT81 388 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 REV1Q9UBZ9 1251 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 ZNF229Q9UJW7 825 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 FBXL3Q9UKT7 428 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 FZR1Q9UM11 496 aa18.21■□□□□ 0.51
CHRNB1-206ENST00000574054 M0R233 179 aa18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 VIMP08670 466 aaKnown RBP18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 TCN1P20061 433 aaPredicted RBP18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 APEX1P27695 318 aaKnown RBP18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 ZP4Q12836 540 aa18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 VMACQ2NL98 169 aa18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 SKA3Q8IX90 412 aa18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 SLC22A24Q8N4F4 322 aa18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 SLC25A44Q96H78 314 aaPredicted RBP18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 SIKE1Q9BRV8 207 aa18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 SLC19A3Q9BZV2 496 aa18.2■□□□□ 0.5
CHRNB1-206ENST00000574054 ENTPD5O75356 428 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 OR8G3PP0DMU2 310 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 IL2RGP31785 369 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 GLRXP35754 106 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 ALDH3B1P43353 468 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 EVX1P49640 407 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 CYLC2Q14093 348 aaPredicted RBP18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 LRP11Q86VZ4 500 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 FGFBP3Q8TAT2 258 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 RASSF5Q8WWW0 418 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 SH3GL3Q99963 347 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 PCDHAC1Q9H158 963 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 TMEM38BQ9NVV0 291 aa18.19■□□□□ 0.5
CHRNB1-206ENST00000574054 BLOC1S5-TXNDC5H3BN57 136 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 FBP2O00757 339 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 DHHO43323 396 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 LILRA1O75019 489 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 FARS2O95363 451 aaKnown RBP18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 BCL10O95999 233 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 IGHG1P01857 330 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 SERPINA5P05154 406 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 TACSTD2P09758 323 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 GZMMP51124 257 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 CRYBA2P53672 197 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 CLRN1P58418 232 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 RIN1Q13671 783 aa18.18■□□□□ 0.5
CHRNB1-206ENST00000574054 MAD2L1BPQ15013 274 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms