RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 GPX8Q8TED1 209 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 FAM117AQ9C073 453 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 SLC17A5Q9NRA2 495 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 PHPT1Q9NRX4 125 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 GPN3Q9UHW5 284 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 CEP290O15078 2479 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 KANTRA0A1W2PQU2 76 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 P2RX6O15547 441 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 WNT11O96014 354 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 MAS1P04201 325 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 DRD3P35462 400 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 GPR143P51810 404 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 RPS4XP62701 263 aaKnown RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 PPIAP62937 165 aaKnown RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 S100A12P80511 92 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 YOD1Q5VVQ6 348 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 BEST3Q8N1M1 668 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 TMEM185AQ8NFB2 350 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 ZCCHC10Q8TBK6 192 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 SLC25A28Q96A46 364 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 USB1Q9BQ65 265 aaKnown RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 MTIF3Q9H2K0 278 aaKnown RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 LYRM4Q9HD34 91 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 ACTR10Q9NZ32 417 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 CPNE7Q9UBL6 633 aa14.26□□□□□ -0.13
COMMD4-215ENST00000566843 ZNF230Q9UIE0 474 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-215ENST00000566843 TRAV18A0A075B6X5 111 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-215ENST00000566843 TMEM72A0PK05 275 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 FGF17O60258 216 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 SRPX2O60687 465 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-215ENST00000566843 CEACAM5P06731 702 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 CT62P0C5K7 136 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 FNTBP49356 437 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 ARHGDIBP52566 201 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 TOMM20Q15388 145 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 MICBQ29980 383 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 LPCAT3Q6P1A2 487 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 ZNF550Q7Z398 422 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 SFTPA1Q8IWL2 248 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 GABRG1Q8N1C3 465 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 ZNF511Q8NB15 262 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 STEAP2Q8NFT2 490 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 OR5M8Q8NGP6 311 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 SMARCD2Q92925 531 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 CTHRC1Q96CG8 243 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 ADAD1Q96M93 576 aaKnown RBP14.25□□□□□ -0.13
COMMD4-215ENST00000566843 OR2A5Q96R48 311 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 SLC25A21Q9BQT8 299 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-215ENST00000566843 TMEM185BQ9H7F4 350 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 SFXN1Q9H9B4 322 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 COA4Q9NYJ1 87 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 NUP210LQ5VU65 1888 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 A0A087WUJ7 227 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 TMEM82A0PJX8 343 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 OR5H14A6NHG9 310 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 H0YC42 278 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 SULT1C2O00338 296 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 GPR75O95800 540 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 RORAP35398 523 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 CDKN2AP42771 156 aaKnown RBP14.25□□□□□ -0.13
COMMD4-215ENST00000566843 LUMP51884 338 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-215ENST00000566843 COL19A1Q14993 1142 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 PLPP4Q5VZY2 271 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 LEG1Q6P5S2 330 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 CDC20BQ86Y33 519 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 ARMC10Q8N2F6 343 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 TMEM229BQ8NBD8 167 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 OR51D1Q8NGF3 324 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 MCHR2Q969V1 340 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 ZNF707Q96C28 371 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-215ENST00000566843 SCPEP1Q9HB40 452 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-215ENST00000566843 DEC1Q9P2X7 70 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 SLC17A4Q9Y2C5 497 aa14.25□□□□□ -0.13
COMMD4-215ENST00000566843 PQLC2LA1A4F0 135 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 TMEM218A2RU14 115 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 OR5K4A6NMS3 321 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 CA3P07451 260 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 CEBPBP17676 345 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 DMWDQ09019 674 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 PAN3Q58A45 887 aaKnown RBP14.24□□□□□ -0.13
COMMD4-215ENST00000566843 AGBL4Q5VU57 503 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 C11orf87Q6NUJ2 197 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 LINC00469Q8N7U9 141 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 ZNF614Q8N883 585 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 OR2G2Q8NGZ5 317 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 SUSD6Q92537 303 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 DVL3Q92997 716 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-215ENST00000566843 VRK1Q99986 396 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-215ENST00000566843 HEBP2Q9Y5Z4 205 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 PDE4DIPQ5VU43 2346 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 RNF222A6NCQ9 220 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 URADA6NGE7 173 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 HIDE1A8MVS5 230 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 FAM171A2A8MVW0 826 aa14.24□□□□□ -0.13
COMMD4-215ENST00000566843 CDC40O60508 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
COMMD4-215ENST00000566843 PAK4O96013 591 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-215ENST00000566843 POU3F4P49335 361 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms