RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZNF503-AS2A6NEH8 195 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 CENPBD1B2RD01 187 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 M0R3H8 397 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 SYNGR3O43761 229 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 EDF1O60869 148 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 RAB36O95755 333 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 IGF2P01344 180 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 IFNA14P01570 189 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 TACSTD2P09758 323 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 OR8G3PP0DMU2 310 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 IFNGR1P15260 489 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 LSP1P33241 339 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 PCGF2P35227 344 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 BIDP55957 195 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 GALK2Q01415 458 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 SNTB2Q13425 540 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 NPTX1Q15818 432 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 VMACQ2NL98 169 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 COQ5Q5HYK3 327 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 SLC35D2Q76EJ3 337 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 RETREG3Q86VR2 466 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 SVOPLQ8N434 492 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 GPR32P1Q8NGA4 272 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF566Q969W8 418 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 MSI2Q96DH6 328 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF426Q9BUY5 554 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 DYNLRB1Q9NP97 96 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 ARGLU1Q9NWB6 273 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 TAS2R5Q9NYW4 299 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 REV1Q9UBZ9 1251 aa10.52□□□□□ -0.73
GTF3C1-204ENST00000564664 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.52□□□□□ -0.737e-7■■■■□ 23
GTF3C1-204ENST00000564664 HTR3EA5X5Y0 456 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 CPSF4LA6NMK7 179 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 RNF13O43567 381 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 LYPD3O95274 346 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 FARS2O95363 451 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 CH25HO95992 272 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 TGFAP01135 160 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 PTHP01270 115 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 SERPINA5P05154 406 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 ASAH2BP0C7U1 165 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF16P17020 682 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 SRD5A1P18405 259 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 CD247P20963 164 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 RBM34P42696 430 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 MTPNP58546 118 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 MRPS11P82912 194 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 PIGFQ07326 219 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 FXNQ16595 210 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 MMEL1Q495T6 779 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 GKAP1Q5VSY0 366 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 KRT80Q6KB66 452 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 LRFN4Q6PJG9 635 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 HDDC2Q7Z4H3 204 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 MYPOPQ86VE0 399 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 OR8J3Q8NGG0 315 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 OR10A6Q8NH74 314 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 C1orf159Q96HA4 380 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 BPESC1Q9GZL8 116 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 C1orf198Q9H425 327 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 STX18Q9P2W9 335 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 GPR160Q9UJ42 338 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 BAG5Q9UL15 447 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 SLC7A7Q9UM01 511 aa10.51□□□□□ -0.73
GTF3C1-204ENST00000564664 A0A0G2JND7 137 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 SH3PXD2BA1X283 911 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 LRRN3E7EW58 273 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 C11orf98E9PRG8 122 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 M0R233 179 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 PHF1O43189 567 aaPredicted RBP10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 DHHO43323 396 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 BCL10O95999 233 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 IGHG1P01857 330 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 ADRA2AP08913 450 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 THRBP10828 461 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 B4GALT1P15291 398 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 GIPRP48546 466 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 PTDSS1P48651 473 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 GZMMP51124 257 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 TMEM33P57088 247 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 SELENOVP59797 346 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 RIN1Q13671 783 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 SELPLGQ14242 412 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 HIST3H3Q16695 136 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 FAM120AOSQ5T036 256 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 NANOGP8Q6NSW7 305 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 TMEM53Q6P2H8 277 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 ERICH5Q6P6B1 374 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 WDR88Q6ZMY6 472 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 SKA3Q8IX90 412 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 SLC22A24Q8N4F4 322 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 LINC01356Q8N9X3 169 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 OR1J2Q8NGS2 313 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 TAMM41Q96BW9 452 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 ECSITQ9BQ95 431 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 NANOGQ9H9S0 305 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 NPHS2Q9NP85 383 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF224Q9NZL3 707 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 SLC7A8Q9UHI5 535 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF346Q9UL40 294 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms