RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 APODP05090 189 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DUX4L2P0CJ85 424 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DUX4L3P0CJ86 424 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DUX4L4P0CJ87 422 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DUX4L5P0CJ88 424 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DUX4L6P0CJ89 424 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DUX4L7P0CJ90 424 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 PRSS3P35030 304 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 CCR4P51679 360 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 ADPRHP54922 357 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DEFA5Q01523 94 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 GPR18Q14330 331 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 ANKRD16Q6P6B7 361 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DNM1P46Q6ZS02 220 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 PXT1Q8NFP0 134 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 OR6K3Q8NGY3 331 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 OR2G2Q8NGZ5 317 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 GPR148Q8TDV2 347 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 C3orf49Q96BT1 292 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 MRPS24Q96EL2 167 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 RBM18Q96H35 190 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 LMF2Q9BU23 707 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 DUX4Q9UBX2 424 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 MOKQ9UQ07 419 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 TMEM272A0A1B0GTI8 110 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 EFCAB7A8K855 629 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 H0Y8X5 98 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 CDC123O75794 336 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 HPP00738 406 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 RPA2P15927 270 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 PRKACAP17612 351 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 POU3F4P49335 361 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 SIGLEC14Q08ET2 396 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF141Q15928 474 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 ISXQ2M1V0 245 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 HYAL4Q2M3T9 481 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 ITPRIPL2Q3MIP1 535 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 ALG10Q5BKT4 473 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 C1orf53Q5VUE5 145 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 TMED4Q7Z7H5 227 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 OR4C3Q8NH37 302 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 SCARF2Q96GP6 870 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 SLC38A3Q99624 504 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 POFUT1Q9H488 388 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 Q9N2J8 555 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 SERINC4A6NH21 518 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 OR4C45A6NMZ5 311 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 DCTN6O00399 190 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 SMAD9O15198 467 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 PLRG1O43660 514 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 PRAMEF2O60811 474 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF432O94892 652 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 CD14P08571 375 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 RPS4XP62701 263 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 MPPED2Q15777 294 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ETFDHQ16134 617 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 STEAP1BQ6NZ63 245 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 DPY19L4Q7Z388 723 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF546Q86UE3 836 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 OR10K1Q8NGX5 313 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 STK35Q8TDR2 534 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 NKX3-1Q99801 234 aaPredicted RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 GAL3ST1Q99999 423 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 PELOQ9BRX2 385 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ATG5Q9H1Y0 275 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 GTF2A1LQ9UNN4 478 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF254O75437 659 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ACHEP22303 614 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 MPGP29372 298 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 LSSP48449 732 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 STARP49675 285 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 PSMD4P55036 377 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 FAM74A1Q5RGS3 127 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 NKAIN2Q5VXU1 208 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF595Q8IYB9 648 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 OR9A4Q8NGU2 314 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 G6PC3Q9BUM1 346 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 GRHPRQ9UBQ7 328 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 CACNA1CQ13936 2221 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 RFPL4AA6NLU0 287 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 TMEM212A6NML5 194 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 RFPL4AL1F8VTS6 287 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 CDC40O60508 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 ABHD16AO95870 558 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 WDPCPO95876 746 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 S1PR1P21453 382 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 SLC25A1P53007 311 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 RAB38P57729 211 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 EIF2B5Q13144 721 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 NPSR1Q6W5P4 371 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 CDC20BQ86Y33 519 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 YAF2Q8IY57 180 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 EIF4E3Q8N5X7 224 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 CCDC107Q8WV48 283 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 MOGAT1Q96PD6 335 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 SLC25A32Q9H2D1 315 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms