RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GIPRP48546 466 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 PTDSS1P48651 473 aaKnown RBP13.98□□□□□ -0.17
SNX1-213ENST00000561026 EVX1P49640 407 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 RAB1AP62820 205 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 ZP4Q12836 540 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 MSMPQ1L6U9 139 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 TRMT5Q32P41 509 aaKnown RBP13.98□□□□□ -0.17
SNX1-213ENST00000561026 FAM120AOSQ5T036 256 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 TTC33Q6PID6 262 aaPredicted RBP13.98□□□□□ -0.17
SNX1-213ENST00000561026 SLC35D2Q76EJ3 337 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 PIWIL3Q7Z3Z3 882 aaKnown RBP13.98□□□□□ -0.17
SNX1-213ENST00000561026 TSPYL5Q86VY4 417 aaPredicted RBP13.98□□□□□ -0.17
SNX1-213ENST00000561026 OR10A6Q8NH74 314 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 VANGL1Q8TAA9 524 aaPredicted RBP13.98□□□□□ -0.17
SNX1-213ENST00000561026 TMEM54Q969K7 222 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 MRPL24Q96A35 216 aaKnown RBP13.98□□□□□ -0.17
SNX1-213ENST00000561026 TAMM41Q96BW9 452 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 MPP4Q96JB8 637 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 PCDHAC1Q9H158 963 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 NPHS2Q9NP85 383 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 NANSQ9NR45 359 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 GLTPQ9NZD2 209 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 SLC7A7Q9UM01 511 aa13.98□□□□□ -0.17
SNX1-213ENST00000561026 LRP5LA4QPB2 252 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 TRAPPC13A5PLN9 417 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 UBL3O95164 117 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 TACSTD2P09758 323 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 SRD5A1P18405 259 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 GLRXP35754 106 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 GZMMP51124 257 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 METTL21CQ5VZV1 264 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 LRRC17Q8N6Y2 441 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 UBASH3BQ8TF42 649 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 SIKE1Q9BRV8 207 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 SOX7Q9BT81 388 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 ZNF426Q9BUY5 554 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 MRPL37Q9BZE1 423 aaKnown RBP13.97□□□□□ -0.17
SNX1-213ENST00000561026 SLC19A3Q9BZV2 496 aa13.97□□□□□ -0.17
SNX1-213ENST00000561026 SYNGR3O43761 229 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 EDF1O60869 148 aaKnown RBP13.96□□□□□ -0.17
SNX1-213ENST00000561026 LILRA1O75019 489 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 RAB36O95755 333 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 ASAH2BP0C7U1 165 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 CHN2P52757 468 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 CRYBA2P53672 197 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 RIN1Q13671 783 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 VMACQ2NL98 169 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 INTS11Q5TA45 600 aaKnown RBP13.96□□□□□ -0.17
SNX1-213ENST00000561026 LRFN4Q6PJG9 635 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 IL17RELQ6ZVW7 336 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 HDXQ7Z353 690 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 SKA3Q8IX90 412 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 SLC22A24Q8N4F4 322 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 SLC26A7Q8TE54 656 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 HPS1Q92902 700 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 ZNF566Q969W8 418 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 SLC25A44Q96H78 314 aaPredicted RBP13.96□□□□□ -0.17
SNX1-213ENST00000561026 MS4A5Q9H3V2 200 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 REV1Q9UBZ9 1251 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 ZNF229Q9UJW7 825 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 FBXL3Q9UKT7 428 aa13.96□□□□□ -0.17
SNX1-213ENST00000561026 A0A0G2JND7 137 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 M0R233 179 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 KPNA4O00629 521 aaPredicted RBP13.96□□□□□ -0.18
SNX1-213ENST00000561026 FBP2O00757 339 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 RNF13O43567 381 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 HIST1H2ABP04908 130 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 SERPINA5P05154 406 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 PATE4P0C8F1 98 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 OR8G3PP0DMU2 310 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 HNF1AP20823 631 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 GALK2Q01415 458 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 RAB39AQ14964 217 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 FXNQ16595 210 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 GKAP1Q5VSY0 366 aaPredicted RBP13.96□□□□□ -0.18
SNX1-213ENST00000561026 NANOGP8Q6NSW7 305 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 CCDC80Q76M96 950 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 HIST3H2AQ7L7L0 130 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 ZNF584Q8IVC4 421 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 FGFBP3Q8TAT2 258 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 RASSF5Q8WWW0 418 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 HIST1H2ACQ93077 130 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 PRSS27Q9BQR3 290 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 TPK1Q9H3S4 243 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 VIPAS39Q9H9C1 493 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 NANOGQ9H9S0 305 aa13.96□□□□□ -0.18
SNX1-213ENST00000561026 LYNX1G3V0Z9 82 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 DHHO43323 396 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 ENTPD5O75356 428 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 BCL10O95999 233 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 PGA4P0DJD7 388 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 PGA3P0DJD8 388 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 LYNX1P0DP58 116 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 IL2RGP31785 369 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 RPS23P62266 143 aaKnown RBP13.95□□□□□ -0.18
SNX1-213ENST00000561026 CYLC2Q14093 348 aaPredicted RBP13.95□□□□□ -0.18
SNX1-213ENST00000561026 MELKQ14680 651 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 SNX18Q96RF0 628 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 SYT3Q9BQG1 590 aa13.95□□□□□ -0.18
SNX1-213ENST00000561026 MEPEQ9NQ76 525 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms