RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SLC38A4Q969I6 547 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 OR51B6Q9H340 312 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 PNPOQ9NVS9 261 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 PLEK2Q9NYT0 353 aa15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 V9GYY5 206 aaPredicted RBP15.17■□□□□ 0.02
TSPAN3-208ENST00000560514 LOC102725191A0A1B0GVB3 256 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 TRPC5OSA6NMA1 111 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 HDAC3O15379 428 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 TRAF3IP2O43734 574 aaPredicted RBP15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 ENTPD5O75356 428 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 FOXH1O75593 365 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 KRT75O95678 551 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 CLPTM1O96005 669 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 C1QCP02747 245 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 SERPINA5P05154 406 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 RNASE1P07998 156 aaKnown RBP15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 PRG2P13727 222 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 CBLP22681 906 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 GRPRP30550 384 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 CRISP3P54108 245 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 EGR4Q05215 589 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 OCLNQ16625 522 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 TSTQ16762 297 aaKnown RBP15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 RNF220Q5VTB9 566 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 HHATQ5VTY9 493 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF627Q7L945 461 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 NET1Q7Z628 596 aaPredicted RBP15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 SERPINA11Q86U17 422 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 MIER2Q8N344 545 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 CLIP4Q8N3C7 705 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 ICA1LQ8NDH6 482 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 ELMOD3Q96FG2 381 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 EMC6Q9BV81 110 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 CENPHQ9H3R5 247 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 CDH20Q9HBT6 801 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 AIG1Q9NVV5 245 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF69Q9UC07 566 aa15.16■□□□□ 0.02
TSPAN3-208ENST00000560514 TMEM247A6NEH6 219 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 GCH1P30793 250 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 SLC3A1Q07837 685 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 COX20Q5RI15 118 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 SLC30A7Q8NEW0 376 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF519Q8TB69 540 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 CCL17Q92583 94 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 TSPAN32Q96QS1 320 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 MS4A7Q9GZW8 240 aaPredicted RBP15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 ARMCX1Q9P291 453 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 ZNF281Q9Y2X9 895 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 GPR45Q9Y5Y3 372 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 AUP1Q9Y679 476 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 VWFP04275 2813 aa15.15■□□□□ 0.02
TSPAN3-208ENST00000560514 IGLV3-9A0A075B6K5 115 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 TRAV36DV7A0A075B6V5 113 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 PPIAL4EA0A075B759 164 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 PPIAL4CA0A0B4J2A2 164 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 PPIAL4DF5H284 164 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 SDHDO14521 159 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 SNNO75324 88 aaPredicted RBP15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 IL6P05231 212 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 BCHEP06276 602 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 PPIAL4FP0DN26 164 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 ZNF250P15622 560 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 MDKP21741 143 aaPredicted RBP15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 UFM1P61960 85 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 LEG1Q6P5S2 330 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 C17orf107Q6ZR85 190 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 ADPRHL1Q8NDY3 354 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 CPEB3Q8NE35 698 aaKnown RBP15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 TAAR8Q969N4 342 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 TEX37Q96LM6 180 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 OR52E6Q96RD3 313 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 ZBTB18Q99592 522 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 PAIP2Q9BPZ3 127 aaKnown RBP15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 MRI1Q9BV20 369 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 SPATA9Q9BWV2 254 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 BCL2L14Q9BZR8 327 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 RNF121Q9H920 327 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 ZNF224Q9NZL3 707 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 TESQ9UGI8 421 aaKnown RBP15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 IFT52Q9Y366 437 aa15.14■□□□□ 0.01
TSPAN3-208ENST00000560514 ALDOCP09972 364 aaKnown RBP15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 PATE4P0C8F1 98 aa15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 CRATP43155 626 aa15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 WDR4P57081 412 aaKnown RBP15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 PDCD4Q53EL6 469 aaKnown RBP15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 PIWIL3Q7Z3Z3 882 aaKnown RBP15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 CCT8L2Q96SF2 557 aa15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 ASPNQ9BXN1 380 aa15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 LRMDAQ9H2I8 198 aa15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 C1orf198Q9H425 327 aa15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 C12orf10Q9HB07 376 aa15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 PURGQ9UJV8 347 aaKnown RBP15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 CACNG2Q9Y698 323 aa15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 PRKDCP78527 4128 aaKnown RBP15.13■□□□□ 0.01
TSPAN3-208ENST00000560514 MS4A18H0YCH9 400 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 CLDN34H7C241 214 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 FZD7O75084 574 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 FARS2O95363 451 aaKnown RBP15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 KNG1P01042 644 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms